Pseudomonas iranensis: HU724_007890
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Entry
HU724_007890 CDS
T07894
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
pie
Pseudomonas iranensis
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pie03009
]
HU724_007890
Enzymes [BR:
pie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HU724_007890
Ribosome biogenesis [BR:
pie03009
]
Prokaryotic type
rRNA helicases
HU724_007890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QXI24187
LinkDB
All DBs
Position
1781707..1783047
Genome browser
AA seq
446 aa
AA seq
DB search
MFSQFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILN
RLIGPAKIRVSIKTLILLPTRELAQQTLKEVERFSQFTFIKSGLITGGEDFKVQAAMLRK
VPDILIGTPGRMIEQLNAGNLDLKEVEVLVLDEADRMLDMGFAEDVQRLVDECPNRQQTM
LFSATTGGSGLREMIAKVLNNPEHLQLNAVSQLNSTTRQQIITADHNQHKEQIVNWLLAN
ETYQKAIVFTNTRAMADRIYGRLVAQEYKAFVLHGEKDQKDRKLAIDRLKQGGVKILVAT
DVAARGLDVDGLDLVINFDMPRSGDEYVHRIGRTGRAGNDGLAISLICHGDWNLMSSIER
YLKQSFERRTIKEVKGTYGGPKKVKASGKAVGVKKKKTDAKGDKKKTAAKTPTKRKSVNR
PKPDSLVSSDGMAPLKRRKPAEPAAE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtgttttcccaattcgccctgcacgaacgcctgctcaaagccgtggccgagctgaaattt
gtcgagccaacgccagtgcaagccgcggccatcccgctggcgctccaggggcgtgatctg
cgggtgacggcgcaaaccggtagcggcaaaaccgccgctttcgtcctgccgatcctcaat
cgcctgatcggcccggcgaagatccgcgtcagcatcaagacgctgatcctgctgccgacc
cgtgaactggcccagcagaccttgaaggaagtcgaacgcttctcgcagttcaccttcatc
aagtccggcctgatcactggcggcgaagacttcaaggtgcaggcggccatgctgcgcaaa
gtgccggacatcctcatcggcaccccggggcggatgatcgagcagctcaatgccggcaac
ctcgacctgaaagaagtcgaagtgctggtcctcgacgaagccgaccgcatgctcgacatg
ggtttcgccgaagacgtgcagcgtctggtcgatgaatgcccgaaccgtcagcagaccatg
ctgttctccgccaccaccggcggttccggcctgcgcgagatgatcgccaaggtcctgaac
aacccggagcacctgcagctcaacgccgtcagccagctcaactcgacgactcgtcagcaa
atcatcaccgccgaccacaatcagcacaaagagcagattgtgaactggctgctggccaac
gagacctaccagaaggccattgtcttcaccaacacccgcgccatggccgaccgtatctac
ggccgcctcgtggctcaggaatacaaagcgttcgtgctgcacggcgagaaagaccagaag
gatcgcaaactggcgatcgatcgtctgaagcagggcggtgtgaagatcctcgtcgcgacc
gacgttgcggcccgtggtctggacgtcgacggtctggatctggtgatcaacttcgacatg
ccacgcagcggcgacgaatacgtgcaccgcatcggtcgtaccggccgcgccggcaacgac
ggtctggcgatctcgctgatctgccacggcgactggaacctgatgtcgagcatcgagcgc
tacctgaagcagagcttcgagcgccgcacgatcaaggaagtcaaaggcacctacggcgga
ccaaaaaaggtcaaggcttcgggcaaagccgtcggcgtgaagaagaaaaagaccgacgcc
aagggcgacaaaaagaaaaccgccgccaagacgccgaccaagcgcaagagcgtgaaccgg
ccgaagccggattccctggtcagcagcgacggcatggccccgctcaagcgccgcaagcca
gccgagcctgcggctgagtaa
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