Pseudomonas iranensis: HU724_008130
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Entry
HU724_008130 CDS
T07894
Symbol
rluB
Name
(GenBank) 23S rRNA pseudouridine(2605) synthase RluB
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pie
Pseudomonas iranensis
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pie03009
]
HU724_008130 (rluB)
Enzymes [BR:
pie01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
HU724_008130 (rluB)
Ribosome biogenesis [BR:
pie03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HU724_008130 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QXI24234
LinkDB
All DBs
Position
1836637..1837857
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AA seq
406 aa
AA seq
DB search
MSDINQKDDQEIGPAGEKLQKVLARIGVGSRRDVESWISQGRIKVNGKDATLGLRVDMHD
AITIDGKVIKREEAAESVRRVIMYNKPDGEICTRDDPEGRPTVFDKLPRPKEGRWINIGR
LDINTTGLLMFTTDGELANRLMHPSYEMDREYAVRVRGEVDDEMIERLKAGVVLEDGPAR
FTDIQQAPGGEGFNHWYHCVVMEGRNREVRRLWESQGLVVSRLKRVRFGPVFLNSDLPMG
RWREMSQYEVDVLSAEVGLTPVAMPQLNAKSKDKLERMQRKSSRPMAKTERVRTLRPAAG
APTAPRPSREPQIEGERPGRKPVARDGERTPRPANGRTERGERGAPAGRGTPVADRPADT
SNKRPAKPAPKRPGIKLVDGDKPSGKRRGAPAGSGQRPGFGRKKPE
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacatcaatcagaaagacgaccaggaaatcggcccagcaggcgaaaagctgcag
aaagtcctcgcccgtatcggcgtcggctcgcgccgtgacgtggaatcctggatcagccag
ggccggatcaaggtcaatggcaaagacgccaccctcggcctgcgcgtcgacatgcacgac
gccattaccatcgatggcaaggtgatcaaacgcgaagaggctgccgaatcggtgcgccgc
gtgatcatgtacaacaagcccgacggcgaaatctgcacccgtgacgacccggaaggccgt
ccgaccgtgttcgacaagctgccgcgtccgaaagagggccgctggatcaacatcggccgt
ctcgacatcaacaccaccggtctgctgatgttcaccactgacggtgagctggccaaccgt
ctgatgcacccgtcctacgagatggaccgcgagtacgccgtgcgtgtacgcggtgaagtc
gatgacgagatgatcgaacgcctcaaggccggcgtggtgctggaagacggcccagcgcgt
ttcaccgacattcaacaggcgccgggcggtgaaggcttcaaccactggtaccactgcgtg
gtcatggaagggcgtaaccgtgaagtgcgtcgtctgtgggaatcgcagggtctggtggtc
agccgtctgaagcgcgtgcgtttcggtccggtgttcctcaactccgacctgccgatgggc
cgctggcgcgaaatgagccagtacgaagtcgacgtgctcagcgccgaagtcggcctgacc
ccggtggcaatgccgcagctgaacgccaagagcaaggacaagctcgaacgcatgcagcgc
aaatcgtcgcggccaatggccaagaccgagcgcgtgcgtactctgcgtccagccgctggc
gcacccaccgcaccgcgcccgagccgtgagccgcagattgaaggtgagcgtccaggtcgc
aagccggttgcccgtgacggcgagcgcacaccgcgtccggccaatggtcgtaccgagcgt
ggcgaacgcggcgctcctgccggtcgcggtacgccagtggcggatcgtcctgccgacacc
agcaacaagcgcccggccaaaccggcgccgaagcgtccggggatcaaactggtcgacggc
gacaagccctccggcaagcgtcgcggcgcaccggccggttccggtcagcgcccgggtttc
ggtcgcaaaaagccggaataa
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