Pseudomonas iranensis: HU724_008335
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Entry
HU724_008335 CDS
T07894
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
pie
Pseudomonas iranensis
Pathway
pie02020
Two-component system
pie02025
Biofilm formation - Pseudomonas aeruginosa
pie02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HU724_008335
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU724_008335
09142 Cell motility
02040 Flagellar assembly
HU724_008335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pie03000
]
HU724_008335
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pie02035
]
HU724_008335
Transcription factors [BR:
pie03000
]
Prokaryotic type
Helix-turn-helix
Other families
HU724_008335
Bacterial motility proteins [BR:
pie02035
]
Flagellar system
Flagellar assembly proteins
Others
HU724_008335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_7
nSTAND3
AAA_22
bpMoxR
AAA
GAAD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QXI24273
LinkDB
All DBs
Position
1884617..1886092
Genome browser
AA seq
491 aa
AA seq
DB search
MWRETKILLIDDDSVRRRDLAVILNFLGEENLPCGSHDWQQAVGSLSSSREVICVLIGTV
NAPGALLGLLKTLATWDEFLPVLLMGDNSSVDLPEDQRRRVLSTLEMPPSYSKLLDSLHR
AQVYREMYDQARERGRHREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRRDAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSVDVRIIAATHKNLESMIEIGSFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSAAIMSLCRHGWPG
NVRELANLVERMAIMHPYGVIGVVELPKKFRYVDDEDEQMVDSLRSDLEERVAINGHTPD
FSASALLPPEGLDLKDYLGGLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGM
SRAGGDEQADD
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaaaattctgctgatcgatgacgatagcgtccgccgccgcgacctg
gcggtgattctgaattttcttggcgaagaaaatttaccctgcggcagccatgactggcag
caggcagtcggctctttgtcgtctagtcgtgaggtcatttgcgtactgatcgggacggtc
aatgctcctggcgcgcttttgggcttgctaaagacactcgcaacctgggatgagttcctt
ccggttttgttaatgggcgataattcttccgttgacctgcctgaagaccagcgtcgacgc
gtcctgtcgacccttgaaatgccgcccagctacagcaaattgctcgattcgctgcaccgc
gcccaggtctatcgtgaaatgtacgaccaggcccgcgagcgcggccgtcatcgcgaaccc
aatcttttccgcagtcttgtcggcaccagccgcgcgattcagcacgtccggcagatgatg
cagcaggtggccgacaccgacgccagcgtactgatcctcggcgagtccggcaccggcaag
gaggtggtcgcgcgcaacctgcactatcactccaagcgccgcgacgcgccattcgtgccg
gtcaactgcggggcgatccctgcagagctgctcgaaagcgaactgttcggccatgagaag
ggcgccttcactggcgcgatcaccagccgtgccgggcgctttgagctggccaacggcggt
acgctgttccttgacgaaatcggcgacatgccgctgccgatgcaggtcaagctgctgcgc
gtattgcaagagcgcacctttgagcgcgtgggcagcaacaagacgcaaagcgtcgacgtg
cgcatcattgccgcaacccacaagaatctcgaaagcatgatcgagatcggctcgttccgc
gaagacctctactatcgcctgaacgtgttcccgatcgagatggcgccgctgcgtgagcgc
gtcgaagacatcccgctgttgatgaacgaactgatctcgcgcatggagcacgagaagcgc
ggttcgatccgtttcaactcggcagcgatcatgtcgctgtgccgtcacggctggccgggc
aacgtccgcgagctggccaacctcgtcgagcgcatggcgatcatgcacccgtacggagtg
atcggcgtggtcgagttgccgaagaaattccgctacgtcgacgacgaagacgagcagatg
gtcgacagcctgcgcagtgatctggaagagcgcgtcgcgatcaacggccatacgcctgac
ttcagcgccagtgcactgctgccgccggaaggcctcgatctcaaggactacctcggtggc
ctggagcagggcctgattcagcaagccctggacgacgccaatggcattgttgcccgcgcc
gctgagcgtctgcgcatccgtcgcacgaccctggtcgagaagatgcgcaagtacggcatg
agccgggccggaggagatgaacaggcggatgattga
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