Pseudomonas iranensis: HU724_008745
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Entry
HU724_008745 CDS
T07894
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pie
Pseudomonas iranensis
Pathway
pie00020
Citrate cycle (TCA cycle)
pie00190
Oxidative phosphorylation
pie00650
Butanoate metabolism
pie00720
Other carbon fixation pathways
pie01100
Metabolic pathways
pie01110
Biosynthesis of secondary metabolites
pie01120
Microbial metabolism in diverse environments
pie01200
Carbon metabolism
Module
pie_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pie_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pie_M00149
Succinate dehydrogenase, prokaryotes
pie_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HU724_008745 (sdhA)
00650 Butanoate metabolism
HU724_008745 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
HU724_008745 (sdhA)
00720 Other carbon fixation pathways
HU724_008745 (sdhA)
Enzymes [BR:
pie01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
HU724_008745 (sdhA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Pyr_redox_2
GIDA
FAD_binding_3
Thi4
Pyr_redox_3
NurA
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
QXI24354
LinkDB
All DBs
Position
1966370..1968142
Genome browser
AA seq
590 aa
AA seq
DB search
MANIPTISFDAIIIGGGGAGMRAALQLAQGGHKTAVITKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCQEGPAAVFELDHMGLPFSRTEQGRIYQRP
FGGQSKDYGKGGQAARTCAASDRTGHALLHTLYQGNLKAGTTFLNEYYAVDLVKNQEGEF
VGVIAICIETGETSYIRAKATVLATGGAGRIYASTTNALINTGDGVGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYAPNAKDLAGRDVVARSMVKEI
IAGNGCGPNGDHVMLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVVPTCHYMMG
GVATNIHGQAITQNAEGQDQIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEKALTDGIEYDDATESDIEAALSRLNALNNRTDGEDVATLRRELQSCMQNYFGVFRTGE
YMQKGIAQLADLRKRIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEVRKESRG
AHAREDFEDRDDENWLCHTLYFPGDKRVTKRAVNFSPKTVPTFEPKVRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggctaacattccaacgatttctttcgacgccatcattattggtggtggcggtgccggc
atgcgcgctgcgctgcagctggcacagggcggccacaagactgcggtgatcaccaaggtt
ttcccgacccgttcgcacactgtatccgcgcagggcggcatcacgtgcgccatcgcttcc
gccgacccgaacgatgactggcgctggcacatgtacgataccgtcaagggttccgactac
atcggtgaccaggacgctatcgaatacatgtgtcaggaaggcccggccgctgttttcgag
ctggaccacatggggctgccgttctcgcgtaccgagcaaggccgcatctaccagcgtccg
ttcggtggccagtccaaggactacggcaagggcggtcaggctgcacgtacttgcgctgcg
tccgaccgtaccggtcacgcgctgctgcacacgctttatcagggcaacctgaaagccggc
accacgttcctcaacgagtactacgctgttgatctggtgaaaaaccaggaaggcgaattc
gttggtgtgatcgcgatctgcatcgaaaccggcgaaacctcctacatccgtgccaaggcc
accgttctggccactggcggtgcaggccgtatctacgcgtccaccaccaacgccctgatc
aacaccggtgatggcgtcggcatggctctgcgtgctggcgtgccggtgcaagacatcgaa
atgtggcagttccacccgaccggcatcgccggcgccggtgtactggttaccgaaggttgc
cgtggtgaaggtggttacctgatcaacaagcacggcgagcgtttcatggagcgttatgct
ccgaacgcgaaagaccttgcaggtcgtgacgtggttgcccgttcgatggtcaaggaaatc
atcgccggcaacggttgcggtccgaatggcgaccacgtgatgctcaaactcgaccacctg
ggcgaggaagtgctgcacagccgtctgccaggcatctgcgaactgtcgaagactttcgcc
cacgttgacccggtcgttgctccggttccggttgtgccgacctgccactacatgatgggc
ggcgttgccaccaacattcatggccaggcgatcacccagaacgccgaaggtcaggatcag
atcattcctggcctgttcgcggtaggcgaagtggcttgcgtatcggttcacggtgcgaac
cgtctgggcggcaactcgctgctcgacctggtggtattcggtcgcgctgccggcctgcac
ctggaaaaggcgttgaccgatggcatcgaatacgacgacgctaccgagtccgacatcgaa
gctgcactatcgcgtctgaacgcgctgaacaaccgtaccgacggtgaagacgttgccacc
ctgcgtcgcgagctgcaaagctgcatgcagaactacttcggtgtattccgtaccggcgaa
tacatgcagaagggcatcgctcagctggccgatctgcgcaagcgtatcgccaacgtgaag
atcaacgacaagtcgcaagcgttcaacactgcacgtatcgaagcgctggaattgcagaac
ctgctggaagtggctgaagctaccgccatcgcggccgaagtacgtaaagagtcccgcggc
gctcacgcccgtgaagacttcgaagaccgtgatgacgaaaactggctgtgccacaccctg
tacttcccgggtgacaagcgcgtcaccaagcgtgccgtgaacttctcgccgaagactgtt
ccgactttcgaacctaaagtccggacttattaa
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