Pseudomonas iranensis: HU724_010135
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Entry
HU724_010135 CDS
T07894
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pie
Pseudomonas iranensis
Pathway
pie03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HU724_010135 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pie03400
]
HU724_010135 (uvrB)
DNA repair and recombination proteins [BR:
pie03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HU724_010135 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HU724_010135 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QXI24615
LinkDB
All DBs
Position
2302715..2304730
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFEPAGDQPEAIRQLVEGIDAGLAHQTLLGVTGSGKTFSIANVISQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQY
TRNDMDFARATFRVRGDVIDIFPAESDLEAIRIELFDDEVESISAFDPLTGEVIRKMPRF
TFYPKSHYVTPRETLLDAIEGIKVELQERLEYLRSNNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPAGAAPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWEGVSPQTIFVSATPGNYEAEHAGRVVEQVVRPTGLVDPQ
VEVRPALTQVDDLLSEITKRVAIEERVLVTTLTKRMAEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGVFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRMTGSMERAIGETERRREKQIAFNLENGITPKGVIKDVADIMEGATV
PGSRSKKRKGMAKAAEENAKYEAELRSPSEITKRIRALEEKMYQLARDLEFEAAAQMRDE
IAKLRERLLTV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaattccagctagtcacccgcttcgagcctgccggcgatcagccggaagccatt
cgccagttggttgagggcattgacgccgggctggcgcaccagacactgctcggtgtgacc
ggttcgggcaaaaccttcagcatcgccaacgtcatctcccaggtccagcggccgacgctc
gtactggcgccgaacaagaccctggccgcgcagttgtacggggagttcaaggcgttcttc
ccgaacaacgccgttgaatacttcgtttcctactacgactactaccagcccgaagcgtat
gtgccgtcgtccgacaccttcatcgagaaggacgcctcgatcaacgaccacatcgagcag
atgcgcctgtccgcaaccaaagcgttgctcgagcgcaaggacgcgatcatcgtcaccacg
gtctcatgcatctacggtctgggcagtccggaaacctatctgaaaatggtcttgcacgtt
gatcgcggtgacaagctcgatcagcgcgcgctgttacggcgcctggccgacttgcaatac
acccgcaacgacatggatttcgcccgggcgacgttcagagtgcgcggtgacgtgattgat
atcttcccggcggaatccgatctggaagcgatccgcatcgagctgttcgatgacgaggtc
gagagcatttccgccttcgacccactgaccggcgaagtcatccgcaagatgccgcgtttc
actttctatccgaagagtcactacgtgacgcctcgggaaaccctgctcgacgccatcgaa
ggcatcaaggtcgaattgcaggagcgcctcgaatacctgcgcagcaacaacaaactggtg
gaagcccagcgtcttgaacagcgcacccgtttcgacctggaaatgatcctcgaactgggc
tattgcaacggcatcgaaaactactcgcgctacctgtccgggcgtccggccggcgcggcg
ccgcccaccctttacgactatctgccggccgacgccttgctggtgatcgacgaatcccac
gtcagcgtgccgcaggtcggcgcgatgtataagggcgaccgctcgcgtaaagagacgctg
gtcgagtacggcttccgcctgccttcggcgctggacaaccggcccatgcgtttcgacgag
tgggaaggggtcagcccgcagaccattttcgtctcggcaacgcccggcaattacgaagct
gaacacgccgggcgggtggttgagcaggtggtgcggccgaccggcctggtcgacccgcag
gttgaagtgcggccggcgctgactcaggtcgatgacttgctctcggaaatcaccaagcgc
gtggcgatcgaagaacgtgtgctggtcaccacgctgaccaagcgcatggccgaagacctg
accgattacctcgccgaccacggcgtgcgcgtgcgttatctgcactcggacatcgacacc
gtcgagcgcgtcgagatcatccgcgatttgcgcctgggcgtgttcgatgtgctggtcggg
atcaacctgctgcgtgaaggcctcgacatgccggaagtgtcgctggtggcgattctcgat
gccgacaaggaaggcttcctgcgttccgagcgctcgctgatccagaccatcggtcgcgcg
gcgcgtaacctcaatggccgggcgattctctacgccgatcgcatgaccggttcgatggag
cgggcgattggtgagaccgagcgccgtcgcgagaagcagatcgccttcaaccttgagaac
ggcattaccccgaaaggtgtgatcaaggacgtcgccgacatcatggaaggcgccaccgtg
ccgggttcgcgcagcaagaagcgcaaaggcatggccaaggccgccgaagagaacgccaag
tacgaagccgagttgcgctcgccaagcgaaatcaccaaacgcatccgcgcgctggaagag
aagatgtaccaactggcgcgggatctggagtttgaagcggcggcgcagatgcgtgacgag
attgccaaactgcgcgaacggcttctcaccgtttga
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integrated database retrieval system
