Pseudomonas iranensis: HU724_011320
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Entry
HU724_011320 CDS
T07894
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pie
Pseudomonas iranensis
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pie03000
]
HU724_011320
Transcription factors [BR:
pie03000
]
Prokaryotic type
Helix-turn-helix
LysR family
HU724_011320
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
FAD_binding_4
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QXI24826
LinkDB
All DBs
Position
2528901..2529836
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AA seq
311 aa
AA seq
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MTIKQIRAFLAVAHSLSFAVACERLHLSQSALSLTIKALEEGLGGRLFSRNTRNVALTPE
GESLLPLARRLIADWDNAEDEMRQRFSLQRGRVTLAAMPSFAGNLLPPILKSFRARYPNV
NVTVNDVINEQVLEMVRDRQVELGVAFAPMQSTSMTFTPLYVDRFVAVVPADSALAGRAD
IDWQTLLEQPFITLQRPSTVRVMLEEHLQARGMKLPVEFESHQLATVGRMVASGLGVSAV
PALCAGQMRELGAHCLTLNDSVERAIGVLTEPGNELSAAAQALFEILKAEDLQRQFDFPL
TPGARKQSAER
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcaaacagatccgtgcctttctcgccgtggcccatagcctgagcttcgccgtg
gcctgcgagcgtctgcacctgtcgcagtcagcgctcagcctgaccatcaaggcgctggag
gagggtttgggcgggcgtttgttcagtcgcaacacgcgcaatgtcgcgctgaccccggaa
ggcgaatccctgctgccactggcgcgccgcttgatcgccgattgggacaacgccgaagac
gagatgcgccagcgtttcagcctccagcgcggacgcgtgacgctggcggcgatgccgtca
tttgccggcaatctgctgccgccgattctcaagagcttccgcgcgcgttatccgaacgtc
aacgtcacggtcaacgacgtgatcaacgagcaagtgctggaaatggtccgcgatcgtcag
gttgaactcggtgtggcgttcgcgccgatgcagagcacttcgatgacattcacgcctttg
tatgtcgatcgctttgtcgccgtggtgccggccgattcagcactggccggtcgcgccgac
atcgattggcagaccttgctggagcaaccgttcatcaccctgcagcggccatcgaccgtg
cgggtcatgctggaagagcatttgcaggcgcgcggaatgaagttgccggtggagttcgag
agccatcaattggcgaccgtcgggcgcatggttgccagcgggcttggggtcagcgcggtg
ccggcattgtgcgcggggcagatgcgcgagctcggtgcgcattgcctgaccttgaatgac
tctgtggagcgggcgattggcgtgttgaccgagccgggcaatgagctgtcggcggcggcg
caggcgttgttcgagattctcaaggctgaagatttgcagcgccagttcgatttccccctc
accccgggagcgcggaaacagagcgccgaacgctga
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