Pseudomonas iranensis: HU724_012455
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Entry
HU724_012455 CDS
T07894
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pie
Pseudomonas iranensis
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pie03000
]
HU724_012455
Transcription factors [BR:
pie03000
]
Prokaryotic type
Helix-turn-helix
Other families
HU724_012455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_lid_14
AAA_5
PAS
PAS_4
PAS_9
AAA_2
HTH_7
HTH_23
HTH_22
HTH_30
HTH_50
HTH_AraC
PAS_8
Mg_chelatase
HTH_17
RWP-RK
AAA
HVO_A0261_N
PAS_7
nSTAND3
HTH_20
HTH_29
HTH_Tnp_1
PAS_2
DUF1492
Sigma70_r4_2
HTH_26
IstB_IS21
HTH_38
HTH_28
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QXI25043
LinkDB
All DBs
Position
2758084..2759973
Genome browser
AA seq
629 aa
AA seq
DB search
MKPASINAHARQVLQAVQGSVASHSAAADLAITRSWRRCLDQYQLDPASRRAPDVLEQAR
LREHRAPLEHIISVAHWQMNSLHQQLGRDGHVVLLTDARGVAIDSVFNEAERGEFQRSGL
WLGSVWSEEHEGTNGVGTCLVERQHVTIRRDEHFRGQHVGLTCSASPIFDASGGLLAVLN
LSSVREESSLEQRFKAMALTNLSARLIESCFFLGHDPQRYLLRFHPDAGFVGLLGEGLLS
FDESARICSVNAAALDLLGLSREQMVGQSLTMLLETPMEQLLDQASAQAHVCWPMRLADG
RLFYGQLREPIRSAPLTLAPVPPIKDERVCLEDPRLQRGFARALRVLERDVPVFLQGETG
TGKEAFAAALHRASSRAGQPFVAINCAAIPETLIESELFGYRGGSFTGARKDGMVGKLEQ
AHGGILFLDEIGDMPLALQTRLLRVLEERQVVPLGSATPRPLDVRLISASHQNLPACVAD
GRLREDLFYRIGGFAVELPPLRERSDKGRLLDLLLREEAAGATVRLQAGVRERLLAQPWP
GNVRQLRTCLRTLVALAVEGRVTLEDVHELLPASDDQPVDDPLGVSERQTLLSMIEAEHW
HVARVARRLGISRNTLYRKLRQHGITRPG
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccggcctcgatcaacgcccacgcgcgccaggtactgcaagccgtgcagggctct
gttgccagccacagcgcggcggcagacctggcgatcacccgttcgtggcggcgctgcctg
gatcaataccagctcgatccggccagccgccgcgcgccggacgtgctcgaacaggcgcgt
ttgcgcgaacaccgtgcgccgttggaacacatcatctccgttgcgcattggcagatgaac
agcctgcaccagcaactgggacgtgacggccatgtcgtgctgctcaccgatgcgcgcggc
gtggcgatcgacagcgtgttcaacgaagccgaacgcggcgagttccagcgctccgggctg
tggctcggctcggtctggagcgaggagcacgagggcaccaacggtgtcggcacctgcctg
gtcgagcgccagcacgtgaccattcgccgcgacgagcatttccgtggccagcacgtcggc
ctgacctgttcggccagcccgatattcgacgccagcggtgggttgctcgcggtgctcaac
ctttcctccgtgcgcgaggaaagcagccttgagcaacgcttcaaggccatggccctgacc
aatctgtcggccaggttgatcgagagctgttttttcctcggccacgatccgcagcgctat
ttgctgcggtttcatcccgacgccgggtttgtcgggctgctgggtgaaggcctgctcagc
ttcgacgagagtgcgcggatctgttcggtgaatgcggcggcgctggatctgttgggcctg
agccgcgagcagatggtcgggcagtcgttgaccatgttgctggaaacgccgatggagcag
ttgctcgatcaggccagtgctcaggcgcacgtctgctggccgatgcgcctggccgacggg
cgcttgttctacggccagttgcgcgaaccgatccgctccgcgccgttgacccttgcgcct
gtcccgccaatcaaggatgagcgcgtgtgcctggaagacccgcgcctgcaacgcggattc
gctcgcgcgttgcgtgtactggagcgtgacgtgccggtgtttctgcagggtgaaaccggc
accggcaaggaggcctttgcggcagcgctgcatcgcgccagctcccgcgccggccagccg
tttgtcgcgatcaactgcgcggcgatccccgagacgctgattgaaagcgagctgttcggc
tatcgcggcggcagcttcaccggcgcgcgcaaggacggcatggtcggcaagcttgagcag
gcccatggcggcattctgtttctcgacgaaatcggcgacatgcccctcgcgctacagacc
cgtctgctgcgcgtgctcgaagagcgccaggttgtgccgctgggcagcgcaacgccgcga
ccgcttgatgtacgcctgatcagcgccagtcaccagaatctgccagcctgcgtggccgac
ggacgtctgcgcgaggacctgttctatcgcattggcggtttcgccgtggaactgccgccg
ctgcgcgagcgttccgacaagggccgtctgctcgacctgctgctgcgcgaagaagcggcg
ggcgccactgtgcggctgcaagcgggagttcgagagcgcttgctggcgcagccctggccg
ggcaacgtccggcaactgcgcacctgtctgcggacgttggtggcgttggcagtggaaggc
cgggtcacgctggaggacgtgcacgagttactgcccgcaagtgacgaccaacctgttgac
gatccactgggcgtatccgaacggcaaactctgctcagcatgatcgaagctgaacactgg
catgtcgcgcgagttgcccgtcgtctggggattagccgcaataccctgtaccgcaagctt
cgtcagcatgggatcactcgacctggttga
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