Pseudomonas iranensis: HU724_014775
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Entry
HU724_014775 CDS
T07894
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
pie
Pseudomonas iranensis
Pathway
pie03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
HU724_014775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pie03400
]
HU724_014775
DNA repair and recombination proteins [BR:
pie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
HU724_014775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
DDRGK
KH_GLD-3_2nd
Motif
Other DBs
NCBI-ProteinID:
QXI20309
LinkDB
All DBs
Position
complement(3306825..3307691)
Genome browser
AA seq
288 aa
AA seq
DB search
MARAIWKGAISFGLVHIPVALVSATSSQGVDFDWLDSRSMDPVGYKRINKVTGKEVTKEN
IVKGVAYEKGRYVVLSEEEIRSAHPVSTQTIDIFSFVDAEQIPLQNIDTPYYLAPDKRGG
KVYALLRETLSKTNKVALARVVLHTRQYLAALMPLESALVLVKLRWPQEVRSLDELALGS
EVTKPQLAKGELDMAKRLVEDMTSEWSPEDYKDEFEDKIMALVEKKAHEGKIEDVETATG
EEERKTADVIDLTELLKRSLGGKAPAKPKAKSTSKAAPAKKTRKASGE
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggctcgggcaatctggaaaggcgcaatcagttttggactggtacacatccccgtggcg
ctggtttcagcgacgtcgtcccaaggcgtggacttcgattggctcgacagccgcagcatg
gacccggtgggctataaacgcatcaacaaggtcaccggcaaggaagtcaccaaagagaac
atcgtcaaaggcgtggcctacgaaaagggccgatatgtggtgctcagcgaggaagaaatc
cgctcggcgcacccggtttccacgcagaccatcgacattttctctttcgtcgacgccgag
cagattccgctgcagaacatcgatacgccctactacctggcaccggacaaacgcggcggc
aaggtctacgcgttgctgcgcgaaaccctgagcaaaaccaacaaggtcgccctcgcccgc
gttgtcctgcatacccgtcaatacctcgccgcgttgatgccgctggagtcggcgctggtt
ctggtgaagctgcgctggccacaggaagtgcgcagccttgatgaactggcgctgggcagt
gaagtgaccaagcctcagttggccaagggcgagctggacatggccaaacgtctggttgaa
gacatgacctcggagtggtcgcctgaggactacaaggacgagttcgaagacaagatcatg
gcgctggtcgagaagaaagcccacgaaggcaagatcgaggacgtcgagaccgccactggc
gaggaagagcgcaagactgccgacgttatcgatttgaccgagctgcttaaacgcagcctc
ggcggcaaggcaccggccaagcccaaggccaaatcaaccagtaaggcggcgccggcgaag
aagactcggaaggcgtccggggagtaa
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