Pseudomonas iranensis: HU724_015360
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Entry
HU724_015360 CDS
T07894
Name
(GenBank) OprD family porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pie
Pseudomonas iranensis
Pathway
pie01501
beta-Lactam resistance
pie02020
Two-component system
Module
pie_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HU724_015360
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HU724_015360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pie02000
]
HU724_015360
01504 Antimicrobial resistance genes [BR:
pie01504
]
HU724_015360
Transporters [BR:
pie02000
]
Other transporters
Pores ion channels [TC:
1
]
HU724_015360
Antimicrobial resistance genes [BR:
pie01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
HU724_015360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
QXI20419
LinkDB
All DBs
Position
3439666..3440961
Genome browser
AA seq
431 aa
AA seq
DB search
MINRAPSRLTLLAMLCGLTGTAHASGFFADAKSDVLLRNFYLSNDYRSPTPTGKNYKQEW
AQGFIGNFSSGFTEGTVGFGIDAHAFAGLKLDGGKGHSGTGLLPVNSDGRSENNYSSAGG
AFKLKVSRTTLAFGEMTVETPVFDTSDKRLQPEYATGFLLNSAEFDNVNLVAGHFTAFKN
QDSSSGQGDFYGYGANTEAGGISFVGADLFSSSPIGGALYASELSDTWHQYYGNLHFKQS
GVLLDANLYHTRDTGRALAGEIDNSAFSLSGKYSFGAHTVMLGWQRINGDTPFDFVGGDS
IYLANSIKYADFNGANERSWQARYDLDLGAFGIPGLNFMTRYVSGSHIDGTHAPKGGAYN
PFDADSGDYQPQQGSGGKHWERDIDLKYVVQTGTAKDLSVQLSHVTHRANEAQAGDDIDR
IYVVIQYPLGF
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaccgcgccccctcccgcctcaccctgcttgccatgctctgcggtctgaccggc
accgcccatgccagcggctttttcgccgacgccaaaagcgatgtcctgctacgcaacttc
tacctcagcaacgactaccgctcgcccacgcccaccgggaaaaactacaaacaggaatgg
gcacaaggctttatcggcaacttctcatccggtttcaccgagggcacagtcggtttcggc
atcgacgcccacgccttcgccggcctgaaactcgatggcggcaagggccactccggcaca
ggcttgctgccggtcaacagcgatggccgtagcgaaaacaactattccagcgctggcggt
gcgttcaagctcaaggtctcgcgtaccactctggccttcggcgaaatgactgtagaaacc
ccagtcttcgacacctccgacaaacgtctgcaaccggaatacgccacaggctttttgctc
aacagcgccgagttcgacaacgtcaatctggtcgccgggcatttcactgcattcaagaac
caggacagctcttccggccaaggcgatttctacggctacggcgccaacaccgaagcgggt
ggcatcagcttcgtcggtgccgacctgttcagctccagcccgatcggcggcgcactctac
gcctcggaactgagcgacacctggcaccagtattacggcaatctgcacttcaaacagtcc
ggcgtgctgctcgacgccaacctctaccacacccgcgacaccggccgcgcactggccggc
gagatcgacaacagcgccttcagcctctccggtaaatacagcttcggcgcgcacacggtg
atgctcggctggcaacgcatcaatggcgacacgccgttcgatttcgtcggcggcgactcg
atctacctcgccaactcgatcaaatacgccgacttcaacggcgccaacgaacgctcctgg
caagcccgctacgacctcgacctcggcgccttcggcatccccggcctgaacttcatgacc
cgctacgtcagcggcagccacatcgacggcacccacgcgccgaagggcggcgcctacaac
ccgttcgacgccgacagcggcgactatcaaccgcaacaaggcagcggcggcaagcactgg
gaacgcgatatcgacctgaaatatgtcgtgcagaccggcaccgcgaaggatctgtcggtg
cagctgtcgcacgtcacccaccgcgccaacgaagcgcaggctggcgatgatattgaccgg
atttacgtggtcatccagtacccgctgggtttctga
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