Pseudomonas iranensis: HU724_017370
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Entry
HU724_017370 CDS
T07894
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pie
Pseudomonas iranensis
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pie01002
]
HU724_017370
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pie01011
]
HU724_017370
Peptidases and inhibitors [BR:
pie01002
]
Cysteine peptidases
Family C82
HU724_017370
Peptidoglycan biosynthesis and degradation proteins [BR:
pie01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
HU724_017370
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QXI20789
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All DBs
Position
complement(3897235..3898851)
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AA seq
538 aa
AA seq
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MFKKYACYLSICLLAAPFVACADEPLPPLETLPTPETQLPVEPRSPLQAVLISLAQSCPA
IAPRLNGPALSQLQAFYEQQDWMPVWASESARLPALRAQLQLLADDGLNPNRYAVATTPP
QDGELCADIDISRNYLQALQDLHYGRLLQSHFEPLWRVDGPPTDRQAQLLSIAVPGMNDI
AAAFDLARPHLPQYQSLRQLYAAQRLQALPQWQPVGNGPLLRPAMADPRVPELARRLYSE
GYLAHALVTPDNAYDDVLVEAVKHFQASHSLQADGVVGPGTIAELNISPLTRRDQLRVNL
ERFRWMAQDMEPSGLVVNVAAAELTLYQGGQPVWQTRTQVGRAERQTPLLKSRVTRLTLN
PTWTVPPTIWKEDKLPEIRKDQTFLSRQNLQVLDANGQPLAAADIDWDNPGNILLRQDAG
PRNPLGKMVIRFPNPFSVYLHDTPSKALFDKGPRAFSSGCVRVEHPLQLRDLLLSPAEKA
RTETLLATGTTHEFRLSAPVPILMTYWTAQVDSSGHVRYAPDIYSHDSALLAGLDRAH
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
ttgttcaaaaagtacgcatgctacttgagcatttgtttgctcgcagcgccgtttgtcgct
tgcgccgatgagccgctgcccccgctcgaaaccctgccgacgcctgaaacgcaattgccg
gtcgagccgcgcagcccgttgcaggcggttttgatcagcctggcgcagtcgtgcccggcc
atcgctccgcgtctcaatggcccggcgttgagccaattgcaggcgttttatgaacagcag
gactggatgccggtgtgggcgagtgagtcggcacgcttgccggcattgcgcgcgcaattg
cagctgctggccgatgatgggttgaatccgaatcgctacgccgtggccactacgccgccg
caggatggcgagttgtgcgccgacatcgacatcagccgcaactacctgcaggccttgcag
gatctgcattacggccgtctgttgcaatcgcatttcgaaccgctgtggcgtgtcgacggc
ccgccgaccgatcgtcaggcgcaactgctcagtattgccgtgccgggcatgaacgatatt
gctgcggcgttcgacctggcgcgtccgcatctaccgcaatatcaaagcctgcgtcagctg
tacgccgcgcaacgcttgcaagccctgccgcaatggcagccggtgggcaacggcccgttg
ctgcgtccggcgatggcagacccgcgcgtgccggaactggcccgacgcttgtacagcgaa
ggttatctggcacacgcactggtgacacctgacaacgcctacgatgacgtgctggtggaa
gccgtgaagcactttcaggccagccattcgttgcaggctgacggcgtggtcgggccgggc
accattgccgagctgaacatcagcccgctgacccgccgcgatcagctgcgcgtcaatctc
gaacgtttccgctggatggcccaggacatggagcccagtgggctggtggtcaacgtggcg
gccgctgagctgacgctgtatcagggcggccaaccagtgtggcagacccgcacccaggtc
ggccgtgccgagcgccagacgccgctgctcaaatcccgcgtcacccgcctgacgctgaac
ccgacctggactgttccgccgactatctggaaggaagacaaactgccggaaattcgcaag
gaccagaccttcctcagccgccagaacctgcaagtgctcgacgccaacggccagcctctg
gcagcggccgatatcgactgggacaacccgggcaacatcctcctgcgtcaggacgccggc
ccgcgcaatccgctggggaaaatggtcatccgtttccccaacccgttttcggtgtacctg
cacgacacgccgagcaaggcgctgttcgacaaaggcccacgggcgttcagttccggttgt
gtgcgcgtcgagcacccgctgcaactgcgcgatctgctgctgtccccggcggaaaaagct
cgcaccgagactttgctggcaaccggcaccacccatgaatttcgcctgtcggcgccggtg
ccgatcctgatgacctactggacggcgcaagtcgacagcagcggccatgttcgttatgcg
ccggacatctacagccacgacagcgcattgctggcgggcctggatcgggcgcactaa
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