Pseudomonas iranensis: HU724_018145
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Entry
HU724_018145 CDS
T07894
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pie
Pseudomonas iranensis
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pie03000
]
HU724_018145
Transcription factors [BR:
pie03000
]
Prokaryotic type
Helix-turn-helix
Other families
HU724_018145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_30
HTH_23
AAA_5
nSTAND6
HTH_38
AAA_2
HTH_7
AAA_3
AAA_7
AAA
Mg_chelatase
HTH_22
HTH_28
AAA_16
HTH_20
nSTAND3
HTH_Tnp_1
HTH_10
HTH_11
DUF2089
AAA_14
HTH_psq
HTH_17
Motif
Other DBs
NCBI-ProteinID:
QXI20942
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Position
4056248..4058086
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AA seq
612 aa
AA seq
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MAAPASPLSHDAIVQTSWQRCRAFGLDHQSAPAFDQLPAAGIARLLDCHHSLVQTTHQEV
LPYYENILSNSNCLIMLADNQGQVLTSWGTQRFIEPNLARGFQAGASWMERSSGTNAIGT
ALACEQAVHIEHDEHFLKANRFMTGSAAPIFDAERKVIAVLDVSSDSYLPPSHTLGMVKM
MSQTVENRLILNLFHGQHFQLTFNTGLNNLDSQWAGLLIFDESGQVLSANRRADNLLGVR
LSRVSVESLFKVSLLELINQPEGLPFALQTSGRNRFQCLLKRPKQTPVQARVFVAEDKPA
SASAISLNSLHFGDSRVEKAVRQAERLLEKDIPLLIHGETGVGKEVFVKALHQASSRQKQ
AFIAVNCAAIPAELVESELFGYEKGAFTGANQKGSIGLIRKADKGTLFLDEIGDMPLPTQ
ARLLRVLQERCVQPVGSSELFPVDLRIISATNRSLREQVQLGRFREDLYYRIGGLTLELP
PLRERSDKQALFKRLWEQHREPTQWAGLSPEVLELFEKHPWPGNLRQVSSVMQVALAMAE
EQPVRPEHLPDDFFVDLEMEPVETAAPLGLDLNDVEALNRELKAAGGNISHLARRLGVSR
NTLYKRLRQIGN
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggccgcacctgcttcgccgctgtcccacgacgcgatcgtccagacctcctggcaacgt
tgccgcgcgtttggcctcgaccaccagagcgccccggccttcgatcaattgcccgccgcc
ggcattgcgcggttgctcgactgccatcactcgctggtgcagaccacgcatcaggaagtc
ctgccctactacgaaaacatcctcagcaactccaactgcctgatcatgctcgccgacaat
cagggtcaggtgctgacctcgtggggcacgcagcgctttatcgagccgaatctggcccgg
ggctttcaggccggggcgagctggatggagcgcagcagcggtaccaacgcgatcggcacc
gcactggcctgtgagcaggcggtgcacatcgaacacgacgaacactttctcaaggccaac
cgcttcatgaccggctccgccgcgccgattttcgacgccgagcgcaaggtcatcgccgtg
ctcgatgtctccagcgacagctacctgccgccctcgcacacgttgggcatggtcaagatg
atgagccagaccgtggagaaccggctgatcctcaacctgttccatggccagcattttcaa
ctgaccttcaacaccgggttgaacaacctcgacagccagtgggccgggttgttgattttc
gatgagagcggacaggtgctgtcggccaatcgccgcgccgacaatctgctcggtgtgcgt
ttgtcccgcgtcagcgttgaaagcctgttcaaggtgtcgctgctggagttgatcaatcag
cccgagggtctgccgtttgccctgcagacctctggacgcaaccgtttccagtgtttgctg
aaacggccgaaacagacaccggtgcaggcgcgggtgtttgtcgccgaggacaagcctgcg
tcagccagtgcgatcagcctcaattcgctgcacttcggcgacagtcgcgtggaaaaagcc
gtacgccaggccgagcgcttgctggaaaaagacattccgttgctgattcacggtgagacc
ggcgtcggcaaggaagtcttcgtcaaagccttgcaccaggccagctcacggcaaaaacag
gcattcattgcagtgaactgcgcagcgatccccgctgaactggtcgagtccgagttgttc
ggttacgagaaaggcgcgttcaccggggccaaccagaaaggcagcatcggcctgatccgc
aaggccgacaaaggcacgctgtttctcgatgagatcggtgacatgccgctgccaactcag
gcgcgtttgttgcgcgtgttgcaggagcgctgcgtgcagccggtgggcagcagcgagttg
tttccggtggacttgcggatcatttccgcgaccaaccgatcattgcgcgagcaggtacaa
ctgggccgctttcgcgaagacttgtactaccgcatcggcggcctgaccctggagctgccg
ccgttacgcgagcgcagtgacaagcaggcgctgttcaaacggctgtgggagcaacatcgc
gagccgacgcaatgggcggggctgagcccggaggtgttggagctgtttgaaaagcatccg
tggccggggaatttgcgtcaggtcagcagcgtgatgcaggtggcgttggccatggccgag
gagcaaccggtgcggccagagcatttgcctgatgatttttttgtcgatctggagatggag
ccagtggagacggcggcgccgttggggctggatttgaatgatgttgaggcgttgaaccgc
gagttgaaggcggccggggggaatatttcgcatctggcgcggcggttgggggtgagtcgg
aatacgctgtataagcggttgcggcaaattggcaactga
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