Pseudomonas iranensis: HU724_019460
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Entry
HU724_019460 CDS
T07894
Name
(GenBank) DEAD/DEAH box helicase
Organism
pie
Pseudomonas iranensis
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SWIM
Motif
Other DBs
NCBI-ProteinID:
QXI21191
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All DBs
Position
complement(4335280..4338573)
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AA seq
1097 aa
AA seq
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MSIFIERLKGLTWTHAFSSKALAKARAYAADDRVEILEIDDRKIEAFCVGSQLQAYEQSI
YLSEDRLGSVNLRCLCSCPVAIDCKHSAAVLYHLLGTGEDASGSDAQTPLGRALEHWLST
IPVPAKPAEESAQTAGTRLFYKLKPTSANGKWLLDIFKVYQLKSGELREVKPMYSLAEML
MRQPGYLSELDLRIARLLVAMHSHHAYYSGYPLEGSSGAELLEMLLRTSRLFLDFEDLRA
LTPGVKRVGQFSWAEQADGGFRAQWSSAEAAQETVLALEPLYYLDREQRQVGPLFTELEE
KLACHLTQAPDIPARQAMQFSHRMSAATQIAPPHKLTERILDDVLPQPQLTLVSGRERSR
WEYVLEHRAALLFTYNGHPAVDRNPEVMILNGSETQRIQRQPALEKKLRQNLQKHGFKKA
TRKSAMDRPGEMFTLPDDSAWLGFMHEGLATLRAADWKIEISPGFHFDVQPVEQWYAEVE
EEATHQWFDLQLGIVVNGERYSLLPILLHLLRTQPRLLDPVNLAQRSDDEKILIELKPSG
FGEPAGAKVALPLSRVKPLMATLGELYLGGHQGDALRLTAPDAARLSMLDGVPLDWQGGE
RLRTFAKRLQNSSHAQVAAPAGLNAQLRPYQLEGLNWMQTLRELEVGGILGDDMGLGKTL
QTLAHLLTEKHAGRLDCPALAVMPTSLIPNWLDEAERFTPQLKVLALHGSGRQKDFATLG
EYDLVLTTYALLPRDLEILQPQLWSVLILDEAQNIKNPLSKAAQAARDLQARQRLCLSGT
PLENHLGELWSQFHFLMPGWLGDSKSFNRDYRTPIEKHGNVQRMQHLTARIKPFLLRRKK
DQVATELPPKTEIIHWVELSDGQRDVYETVRVAMDKKVRDEIARSGVARSQIIILDALLK
LRQVCCDLRLVNMPLTAKALRSGSGKLISLMEMLEELLGEGRRILLFSQFTSMLALIEQE
LQQRGLAYSLLTGDTTDRRTPVRDFQGGKVPLFLISLKAGGTGLNLTAADTVIHFDPWWN
PAVENQATDRAYRIGQNNPVFVYKLIAKGTVEEKIQALQQEKAALAGAVLEGGTTGGFKL
EQSDIEALFAPLPVSRG
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atgagcattttcatcgagcggctcaaagggctgacatggacccacgcattcagtagcaag
gcgttggccaaggcccgggcttatgctgccgatgaccgggtcgagatcctcgagatcgat
gacaggaagatagaggcgttctgcgtcggctcgcaacttcaggcgtatgagcaaagcatt
tatctgtccgaagatcggctggggtcggtaaacctgcgttgcctgtgcagctgtcctgtt
gcaatcgactgcaagcacagcgcagcggtgctctatcacctgctgggcactggcgaggat
gcgtctggaagtgacgcgcagaccccgttgggacgagcgctggagcattggctttcgaca
attcccgtgccggccaagcccgctgaagaaagtgcgcaaaccgcaggtacgcgtctgttt
tacaagctcaaaccgacgtctgcgaacggcaagtggctgctggatattttcaaggtttac
cagctcaagagcggcgaattacgcgaggtcaaaccgatgtactcgctcgcggaaatgctc
atgcgccagcccggctacctgtccgagctggatctgcgcatcgcccggctgttggtcgcc
atgcattcccatcacgcctattacagcggctatccgctggaaggcagcagtggcgccgaa
ctgctggaaatgctcctgcgtacttcgcggctgttcctcgacttcgaagacctgcgagcg
ctgacaccgggggtgaaacgcgtcggtcagttctcttgggctgagcaggccgatggcgga
ttccgcgcgcaatggagcagtgccgaagccgcgcaggaaaccgtgctggcgctggagccg
ctttattatcttgatcgcgagcagcgccaggttggcccgctgttcactgagctggaagaa
aaactcgcctgtcatttgacccaggcgccagatattccggcgcgtcaggccatgcagttc
agccatcgcatgagcgcggcgacccaaattgcgccaccgcacaaactcaccgaacggatc
ctcgatgacgtgctgccgcagccgcaactgaccctggtcagcggccgagaacgctcgcgc
tgggaatatgtgctggagcaccgcgccgctctgctgtttacctacaacggtcatccggcg
gtggatcgcaacccggaagtgatgatcctcaacggcagcgaaacccagcgcattcagcgt
caaccggcgctggaaaagaagctgcgccagaacctgcaaaaacatggcttcaagaaagcc
acgcgcaagagtgcaatggatcgtcctggcgagatgtttaccttgccggatgattccgcc
tggctcgggttcatgcacgaagggctggccacactgcgcgccgcagactggaaaatcgag
atcagtcccggtttccatttcgatgtacaaccggttgaacagtggtacgccgaggtcgaa
gaagaggccacgcatcagtggtttgatctgcagttgggtatcgtcgtcaacggcgaacgt
tacagcttgctgccgatccttctgcacctgttgcggacccagccgcgcttgctcgacccg
gtcaatctggcgcagcgcagcgatgatgaaaaaatcctgatcgagctcaagcccagcggt
tttggcgaaccggcgggcgccaaagtcgcgttgccgctgagtcgggtcaaaccgctgatg
gcgacgctcggcgagctgtacctgggcggacaccaaggcgatgcgctgcgtttgaccgct
ccagacgccgcgcgcctgagtatgctcgatggcgtgccgctggactggcagggcggcgaa
cgtctgcgcacttttgccaagcgtctgcagaattccagccacgcccaggttgctgcgccg
gccggcctcaacgcgcagctgcgcccgtatcaactcgaaggcctgaactggatgcagacc
ctgcgcgagctggaggtcggcggcattctgggcgatgacatgggcctgggtaaaaccctg
cagaccctggcgcatctgctcacggagaaacacgccgggcgtctggactgtccggcactg
gcggtgatgccgaccagcctgattcccaactggctcgacgaggccgagcgcttcacgccg
cagttgaaagtactggcgctgcacggcagcgggcggcaaaaggactttgccactctgggc
gaatacgacttggtgctgaccacttatgcattgctgcccagggacctggaaatcttgcag
ccgcagttgtggagcgtgctgattctcgacgaagcgcagaacatcaagaacccgctgagc
aaagccgcccaggccgcccgtgacttacaggcccgtcagcgcttgtgtctgagcggtacg
ccgctggaaaaccacctcggtgagctgtggtcgcagttccatttcctcatgcccggctgg
ctcggcgacagcaaatccttcaaccgcgattaccgcacgccgatcgagaaacacggcaat
gtgcagcgcatgcagcacctgaccgcgcgcatcaagccgtttttgctgcgacgcaagaag
gatcaggtcgccaccgagttgccaccgaaaaccgagatcatccactgggtcgaactcagc
gatggtcagcgcgacgtctatgagacggtgcgtgtggcgatggacaaaaaggtccgcgac
gaaatcgcccgcagcggcgtggcgcgcagtcagatcatcatcctcgatgcgctgctcaag
ctgcgccaggtctgctgcgatctacgcctggtcaatatgccgctgacggcgaaagcgttg
cgctcgggcagcggcaagctgatcagcctgatggagatgctcgaagaattgctcggcgaa
ggtcggcgcattctgctgttttcccaattcacctcgatgctggcgctgatcgagcaggag
ttgcagcaacgcgggcttgcctactcattgctgaccggcgacaccaccgatcggcgcacg
ccggtgagggatttccagggcggcaaggtgccgttgttcctgatcagcctcaaggccggg
ggcactggtctgaacctgacggcggcggacacggtgattcacttcgatccgtggtggaac
ccagcagtggagaatcaggcgactgatcgggcgtatcgcatcgggcagaacaatccggtg
ttcgtctacaagttgattgccaaaggcaccgtcgaagaaaagatccaggcgttgcagcag
gagaaagcggcgctggccggggcggtgcttgagggtggcacgacgggcggattcaaactg
gaacagagtgatatcgaggcgttgtttgcgccgttgccggtttcccgaggttga
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