Pseudomonas iranensis: HU724_019590
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Entry
HU724_019590 CDS
T07894
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pie
Pseudomonas iranensis
Pathway
pie00550
Peptidoglycan biosynthesis
pie01100
Metabolic pathways
pie01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HU724_019590 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HU724_019590 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pie01011
]
HU724_019590 (mrdA)
Enzymes [BR:
pie01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HU724_019590 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pie01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HU724_019590 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QXI21216
LinkDB
All DBs
Position
complement(4367881..4369773)
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AA seq
630 aa
AA seq
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MPEPIPIKDHEKETRLVNKRLIACALFVFAISCALVVRLYILQVVEFDYHSTISENNRVH
VLPIPPTRGLIYDRNGVLLADNRPSYNLTITRERATDVNQELDEVINLLHLPAEDRTVFD
KAMKQSRHPFTPVTLFYELTEEQIAVLAVNEFRLPGLDVEPQFVRHYPLGAHFAHSIGYV
GRINEKESKALDSVEYRGTQSIGKTGIERFYEAQLHGHVGYEEVETNAQGRVLRVLKHTD
PVPGKNIVLSLDVKLQEAAEAALGDRRGSVVALDPSTGEVLAMVSNPSFDPNLFVTGISS
KEYSALRDSIDRPLFNRVLRGLYAPGSTIKPEVAIAGLDAGVVTPQTRVFDPGYYQLPDF
DHKYRNWNHSGDGWVDMDAAIMRSNDTYFYDLAHKLGIDRLHDYMAMFGLGEKVSLDMFE
ESPGLMPSQAWKRATRRQAWYPGETVILGIGQGYMQVTPLQLAQATALIANKGIWNRPHL
AKSVDGVAPVDEHPMPNILLKDPRDWEQVNHGMQMVMHDARGIARAAAAGAQYRIAGKSG
TAQVVAIKQGERYNREKTLERHRDNALFVGFAPAEHPKIAISVMIENGEAGGRVAGPVVR
QIMDAWLLDKEGHLKPQYAAPSKAPGDPHV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaccaatcccgatcaaggatcatgaaaaagagacgcggctggtcaacaaacga
ttgattgcctgcgctctgttcgtcttcgccatcagctgcgctctggtggtgcgcctgtac
atcctccaggtcgtggagttcgactaccactcgaccatctccgaaaacaatcgcgtccat
gtcctcccgataccgccaacccgtggattgatctacgaccgcaacggtgtgttgctcgcc
gacaatcgccccagctacaacctgaccatcacccgtgagcgtgccaccgacgtcaatcaa
gaattggacgaagtcatcaacttgctgcacttgcctgctgaagaccgcacggtattcgac
aaggcgatgaagcaatcccggcatccgttcacaccggtcaccctgttttatgagctgacg
gaagagcagattgccgtcctggcggttaacgagtttcgcttaccgggacttgatgtcgaa
ccgcagtttgtccgccactatcccctcggcgcacatttcgcccattcgatcggttatgtc
ggtcggatcaatgaaaaagaatcgaaagctctcgactccgtggagtaccgaggtacgcaa
tccattggtaaaaccggtatcgagcgtttttatgaagcgcagttgcacggccatgtcggt
tacgaagaagtcgaaaccaatgctcaaggccgtgtgctacgggtactcaagcacaccgat
ccggtgccaggcaagaacatcgtcctgagcctcgatgtcaagctgcaagaagctgccgaa
gccgctttgggcgaccgtcgtggttcagtggtagctctcgacccgtccactggagaagtg
ctggcgatggtcagcaatccgagtttcgatccgaatctgttcgtcaccgggatcagttcg
aaggaatattcagcgctgcgagattccatcgatcggccattgttcaaccgcgtattgcgt
gggctgtacgccccaggctcgacgatcaaaccggaagtcgccatcgcagggctggacgca
ggcgtcgtaactccgcagacccgcgtattcgatcccggctattaccaattaccggacttc
gatcacaagtatcgcaactggaaccacagtggtgacggttgggtggacatggacgcggcg
atcatgcgctcgaacgacacctacttctatgatctggcgcacaagcttggcattgatcgt
ctgcacgactacatggcgatgttcggccttggagaaaaagtctcgctggatatgtttgaa
gaatcgccaggtctgatgccgtcgcaagcgtggaaacgcgctacacggcgacaggcgtgg
tatcccggcgagacagttattctcggcatcggccagggctacatgcaggtcacaccgctg
caattggcccaagccactgcactgattgccaacaaagggatatggaatcgaccgcatctg
gccaagtcggtcgacggcgttgcgccggttgacgagcacccgatgccgaacattctgctt
aaagatccgcgcgattgggagcaggtcaatcacggaatgcagatggtcatgcacgatgct
cgaggcatcgcacgagcggcggctgcgggggcgcaataccgcatcgctggcaagagtggt
acggcgcaagtggtggcgatcaagcagggtgagcgctacaaccgtgagaaaaccctcgag
cgccaccgtgacaacgccctgtttgtaggattcgcaccggccgaacatccgaagatcgcc
atctcggtaatgatcgagaacggcgaggcgggtggtcgtgttgccggtcccgttgtgcgg
cagatcatggacgcctggttactcgataaggaaggccacctcaagccgcaatacgcagcg
ccgagcaaagcgccgggcgatcctcacgtctga
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