Pseudomonas iranensis: HU724_021720
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Entry
HU724_021720 CDS
T07894
Symbol
fadD2
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD2
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pie
Pseudomonas iranensis
Pathway
pie00061
Fatty acid biosynthesis
pie00071
Fatty acid degradation
pie01100
Metabolic pathways
pie01212
Fatty acid metabolism
pie02024
Quorum sensing
pie04146
Peroxisome
Module
pie_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
HU724_021720 (fadD2)
00071 Fatty acid degradation
HU724_021720 (fadD2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
HU724_021720 (fadD2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
HU724_021720 (fadD2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pie01004
]
HU724_021720 (fadD2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pie04147
]
HU724_021720 (fadD2)
Enzymes [BR:
pie01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
HU724_021720 (fadD2)
Lipid biosynthesis proteins [BR:
pie01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
HU724_021720 (fadD2)
Exosome [BR:
pie04147
]
Exosomal proteins
Exosomal proteins of breast milk
HU724_021720 (fadD2)
Exosomal proteins of breast cancer cells
HU724_021720 (fadD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QXI21614
LinkDB
All DBs
Position
complement(4828437..4830125)
Genome browser
AA seq
562 aa
AA seq
DB search
MQPDFWNDKRPAGVPLDIDMGEFKSVIEVFERSCKKFADRPAFSSMGITLTYAELERQSA
AFAGYLQAHTDLVPGDRIAVQMPNVLHYPIAVFGALRAGLIVVNTNPLYTPREMRHQFKD
SGARALVYLNLFGQKVQEVLPDTDIEYLIEAKMGDLMPTAKGWLVNTVVSKVKKLVPEYS
LPQATSFKSALRMGRGLGIKPLNVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMQQVR
ACLAQLGPDGQPLLREGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLISNPRDIAGFI
KELKNWRFSALLGLNTLFVALMDHPDFKTLDFSSLKLTNSGGTALVKATAERWEQMTGCR
ITEGYGLTETSPVACTNPYGDQSRLGTVGLPVPGTLVKIINDDGVEQPLGERGELCIKGP
QIMKGYWNKPEATAEVLDAEGWFKSGDIAVIDPDGFVRIVDRKKDMIIVSGFNVYPNEIE
DVVMAHPKVANCAVIGVPDERSGEAVKLFVVARESGVSLEELKAYCKENFTAYKVPKHIV
LRESLPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgatttctggaatgacaaacgcccggccggcgtaccgctggacatcgacatg
ggcgagttcaagtcggtcatcgaagtgtttgagcgttcctgcaagaagttcgctgaccgc
ccggcgttcagcagcatgggcatcaccctgacctacgccgaactggagcgccagagcgcg
gcgttcgccggttacctgcaggcccataccgatctggtgccgggggatcgcattgcggtg
cagatgcccaacgttctgcattatccgattgccgtgttcggcgccctgcgcgccgggctg
atcgtggtcaacaccaacccgctgtacacgccacgggaaatgcgccaccagttcaaggat
tccggtgcacgcgcgttggtctacctgaatctgttcgggcagaaagtccaggaagtgctg
cccgacaccgacatcgaatacttgatcgaagcgaagatgggcgacctgatgcccaccgcc
aaaggctggctggtcaacaccgtggtcagcaaagtgaagaaactggttcccgagtattcg
ctgccgcaagccacttcgttcaaaagcgcgctgcgcatggggcgtggtctgggcatcaaa
ccgctgaacgtcggcctcgatgacatcgccgtgctgcaatacaccggcggcaccaccggc
ctggccaagggcgcgatgctcacccacggcaatctggtggcgaacatgcagcaggtgcgc
gcctgtctggctcagctcggcccggacggtcagccgctgttgcgcgaaggccaggaggtg
atgatcgcgccgctgccgctgtaccacatctatgccttcactgcgaattgcatgtgcatg
atggtgtcgggcaaccacaacgtgttgatctccaatccgcgcgacatcgccggcttcatc
aaggaactgaagaactggcgcttctcggcgctgctgggtttgaacaccttgttcgtcgcg
ctgatggatcaccctgacttcaagaccctggatttctccagcctcaagctcaccaactcc
ggcggcaccgcgctggtcaaggccaccgccgagcgctgggagcagatgaccggttgccgt
atcaccgaaggctacggcctgaccgaaacctcgccagtggcctgcaccaacccttacggc
gatcagtcgcggctgggcactgtcggcctgccggtgccgggcacgctggtgaaaatcatc
aacgatgacggcgtcgaacagccgctgggcgagcgcggcgagctatgcatcaaaggcccg
cagatcatgaagggctactggaacaagcccgaagccaccgccgaagtgctggatgccgag
ggctggttcaagtccggtgatatcgccgtgatcgacccggacggtttcgtgcgcatcgtc
gatcgcaagaaggacatgatcatcgtctccggcttcaacgtgtaccccaacgaaatcgaa
gacgtggtcatggcccacccgaaagtcgccaactgcgcggttatcggcgtgccggacgaa
cgttcgggagaggcggtgaagctgtttgtcgtggcgcgggagagcggggtcagcctggaa
gagctgaaggcgtactgcaaagagaatttcacggcctacaaggtgccgaaacacatcgtg
ctgcgtgagtcgttgccgatgacgcctgtaggcaaaattctgcggcgcgagttgcgggat
atcgcctag
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