KEGG   Pseudomonas iranensis: HU724_022265
Entry
HU724_022265      CDS       T07894                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pie  Pseudomonas iranensis
Pathway
pie02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pie00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HU724_022265
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pie02022]
    HU724_022265
Two-component system [BR:pie02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   HU724_022265
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA FleQ Mg_chelatase MCM OKR_DC_1_N AAA_2
Other DBs
NCBI-ProteinID: QXI21717
LinkDB
Position
4963112..4964440
AA seq 442 aa
MLNSVMVVDDESSIRSAVEQWLSLSGFQVQLFSRAEECLAALPEHFAGVILSDVRMPGMD
GLQLLAEVQKRDADLPVILLTGHGDVPMAVEAMRDGAYDFLEKPFSPETLLGSLRRALDK
RRLVLENRALHELADNRAKLDATLLGVSRGLQTLRRQVLDLATLPVNVLIRGETGSGKEL
VARCLHDFGPRAGKPFVALNCAAIPEQLFEAELFGHESGAFTGASGKRIGKLEYADGGTL
FLDEIESMPLAQQVKLLRVLQEQKLERLGSNQSIRVDLRIVAATKPDLLDEARAGRFRED
LAYRLNVAELRLPPLRDRREDIPLLFETFAQNAAQRLGRTFPPLTGAQLSHLLSHDWPGN
VRELANVAERQVLGLDEPVAGIDPGQSLAAQQEAFEAQCLRAALTRHKGDVKAVLEELQL
PRRTFNEKMQRHGLSREMFLAE
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgctcaattcggtgatggtggtcgacgacgaaagcagcattcgcagcgccgtcgaacag
tggttgagcctgtcggggtttcaggtgcagttgttcagccgtgccgaagaatgcctcgcc
gcgctcccggaacattttgccggggtgatcctcagcgacgtgcgcatgcccggcatggac
ggcttgcaattgctcgccgaagtgcaaaagcgcgacgccgatctgccggtgattctgctc
accggccatggcgacgtgccgatggcggtcgaagccatgcgcgatggcgcctacgacttt
ctggaaaaaccgttcagcccggaaaccctgctcggcagcctgcgccgggcgctggacaaa
cgccgcctggttctggaaaaccgtgccctgcacgaactggctgacaaccgcgcaaagctc
gatgcgacactgctcggcgtgtcccgcggtttgcagacattgcgtcggcaagtgctggat
ctggcgacgttgccggtcaacgtgctgatccggggcgaaaccggcagcggcaaggagctg
gtcgcacgttgcctgcatgatttcggcccgcgcgccggtaagccctttgtagcgctcaat
tgcgcggcgatccccgagcaactgttcgaggccgaactgttcggccatgagagcggcgcg
tttaccggcgcctcgggcaagcgcatcggcaagctggaatacgccgatggcggcacgctg
tttctcgacgagatcgaaagcatgccgctggcccagcaggtgaaattgctgcgggtcttg
caggaacaaaagctcgaacggctgggttcgaaccagagcattcgcgttgatttgcgtatc
gtcgcggcgaccaaaccggacctgctcgacgaagctcgcgccgggcgttttcgtgaggac
ctggcgtatcgcctcaacgtcgccgaactgcgcttgccgccgctgcgtgatcgccgcgaa
gacattccattactgtttgaaaccttcgcgcagaacgccgcccagcgtctgggccggacc
tttccgccgttgaccggtgcgcagctcagtcacttgctcagccatgactggccgggcaat
gttcgcgaactggccaacgttgctgagcgtcaggtgttggggctggatgaaccggtcgcc
ggaatcgatccggggcaatcgctggcggcgcagcaggaagccttcgaagcgcaatgcctg
cgcgcggcgttgacccggcacaagggtgatgtcaaagccgtgctcgaagaactgcaactg
ccgcgccgcacgttcaatgaaaagatgcagcggcatgggttgagtcgggagatgtttctg
gcggagtga

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