Pseudomonas iranensis: HU724_023265
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Entry
HU724_023265 CDS
T07894
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pie
Pseudomonas iranensis
Pathway
pie00470
D-Amino acid metabolism
pie00550
Peptidoglycan biosynthesis
pie01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HU724_023265 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HU724_023265 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pie01011
]
HU724_023265 (murD)
Enzymes [BR:
pie01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
HU724_023265 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pie01011
]
Precursor biosynthesis
Amino acid ligase
HU724_023265 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
QXI21908
LinkDB
All DBs
Position
complement(5181382..5182728)
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AA seq
448 aa
AA seq
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MSLIASDHFRIVVGLGKSGMSLVRFLANRGTSFAVADTRDNPPELATLKRDYPHVEVRCG
ELDVEFLCRADELYVSPGLALATPALQAAAARGVKMSGDIELFARNARAPIVAITGSNAK
STVTTLVGEMAAAAGKRVAVGGNLGTPALDLLSDDVELYVMELSSFQLETTDQLNAEVAT
VLNISEDHMDRYSGLPAYHLAKHRIFRGAKQFVVNRQDALSRPLIGEGQPCWTFGLSKPD
FKAFGIREEDGEKYLAFEFQNLMPVRELKIRGAHNQSNALAALALGHAVGLPFDAMLSAL
RTFAGLEHRCQWVRDLDGVAYYNDSKATNVGAALAAIEGLGADIDGKVILIAGGDGKGAE
FNDLRDPVAANCRAVVLMGRDSDKIGAAIGDAVPLIRASSLIDAVAQCRAAAQPGDVVLL
SPACASFDMFKNYEDRGHQFVRAVEELA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtctctgatcgcttctgaccacttccgcatcgttgtcggcctcggcaagagcggcatg
tccctggttcgcttcctggcgaaccggggcacgtcgtttgctgtggccgacacgcgggac
aatccaccggaactggccacgctcaagcgtgactatccgcacgtggaagtgcgttgtggc
gagctggacgtcgaattcctctgccgtgccgacgagctctacgtgagccccggcctggcg
ctggcgaccccggccctgcaagccgccgcagcccgtggcgtgaaaatgtccggcgacatc
gagctgttcgcgcgtaacgcgcgggcgccgatcgtcgcgatcaccggttccaacgcgaaa
agcaccgtcactactctggtcggcgagatggcggctgctgccggcaagcgcgtcgccgtt
ggcggcaacctcggcaccccggcgctggatctgctcagcgatgatgtcgagttgtacgta
atggagttgtcgagtttccagctggaaaccaccgaccagctcaacgccgaggtcgccacc
gtactgaacatcagcgaagaccacatggatcgctacagcggtctgccggcctatcacctg
gccaagcaccggatcttccggggcgcgaagcagtttgtggtcaaccgtcaggatgccctg
agccgtccattgatcggtgaaggtcagccatgctggacctttggcctgagcaaaccggat
ttcaaagcgttcggcattcgcgaagaagacggcgagaagtacctcgccttcgaattccag
aacctgatgccggtgcgtgaactgaagattcgcggcgcgcacaaccagtccaacgctctc
gccgcattggcactgggtcacgcggtgggcctgccgttcgacgccatgctctctgcattg
cgtacgtttgccggccttgagcatcgctgccagtgggtgcgcgatctcgacggcgtggcc
tattacaacgattccaaagccaccaacgttggcgccgctctggccgccatcgaaggcctc
ggtgcggacatcgatggcaaggtcattctgatcgctggcggcgacggcaaaggcgccgaa
ttcaatgatctgcgtgatccggtggcggccaactgccgcgctgtggtgctgatgggccgc
gactccgacaagatcggcgcggccattggcgacgccgtaccgctgattcgcgcgagctcg
ctgatcgacgctgttgcgcaatgccgcgccgctgcccaaccgggcgatgtggtgctgctg
tcgccggcctgcgccagtttcgacatgttcaagaattacgaagaccgtggtcaccagttc
gtccgcgctgtggaggaactggcatga
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