Pseudomonas iranensis: HU724_024480
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Entry
HU724_024480 CDS
T07894
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
pie
Pseudomonas iranensis
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pie03016
]
HU724_024480 (trmA)
Enzymes [BR:
pie01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
HU724_024480 (trmA)
Transfer RNA biogenesis [BR:
pie03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
HU724_024480 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_31
Methyltransf_4
Methyltransf_11
Methyltransf_12
Cons_hypoth95
MTS
RrnaAD
DREV
Methyltransf_15
Ubie_methyltran
TRM5-TYW2_MTfase
PrmA
Motif
Other DBs
NCBI-ProteinID:
QXI22130
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All DBs
Position
5433740..5434819
Genome browser
AA seq
359 aa
AA seq
DB search
MTFDSQAYAEQLEAKVTRLRDLLAPFDAPEPSVFDSPLQNFRLRAEFRLWREGGERHYAM
FSQDDKRTPILIEEFPIASLRINQLMPQLKAAWQASSALSHKLFQVEFLTTLAGDAMITL
CYHRPLDEHWHAAATQLSADLGVSIIGRSKGKREVLGQDYVVEKLEVGGRTFSYRQPEGA
FTQPNGTVNQKMLNWAYEALGDRSDDLLELYCGNGNFTLPLATRVRKVLATEISKTSVNA
ALSNLSDNAVDNVTLVRLSAEELTEALNEVRPFRRLHGIDLKSYEFGSVFVDPPRAGMDP
DTCELTRRFDNILYISCNPDTLAANIAQLHDTHRITKCAMFDQFPWTHHMESGVLLTRR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgactttcgattctcaagcctacgccgaacaactcgaagccaaggtcacgcgcttgcgt
gatctgctggcgccgttcgatgcacccgagccgtcggtctttgattcgccgctgcagaac
ttccgcctgcgcgccgaattccgcctgtggcgcgagggcggcgaacggcattacgcgatg
ttctcccaggacgacaagcgcacgccgatcctcatcgaggaatttccgattgccagcctg
cgcatcaaccagttgatgccgcagttgaaggccgcgtggcaagccagttcggcgctgagc
cacaagctgttccaggtcgaattcctgaccacgctggctggcgacgcgatgatcaccctg
tgctatcaccgtccgctggacgagcattggcacgcggcggcaactcagttgtcggcggat
ctgggcgtgagcatcatcggccgctccaaaggcaagcgcgaagtgctcggccaggactat
gtcgtcgagaaactcgaagtcggcggccgcaccttcagctatcgccagcccgaaggcgcg
ttcacccagcccaacggcacggtgaaccagaagatgctcaattgggcatacgaagccttg
ggcgatcgcagcgacgatctgctcgagctgtactgcggcaacggtaacttcaccctgccg
cttgcgactcgcgtgcgcaaagtgctcgccaccgagatcagcaagacttcggtcaacgcg
gccctgagcaatctcagcgacaacgctgtggataacgtcacgctggtgcgtttgtccgcc
gaggagctgaccgaagcgctcaacgaagtgcgcccgttccgtcgcctgcacggcatcgat
ctgaagagctacgaattcggcagcgtcttcgtcgacccaccgcgcgccggcatggatccg
gacacctgcgaactgacccggcgcttcgacaacatcctctacatttcctgcaacccggac
accctggcggctaacatcgcccagttgcatgacacccaccgcattaccaagtgcgcgatg
tttgaccagttcccgtggacccatcacatggaatccggtgtgctgctgacccggcgttga
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