KEGG   Pseudomonas iranensis: HU724_024570
Entry
HU724_024570      CDS       T07894                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pie  Pseudomonas iranensis
Pathway
pie03030  DNA replication
pie03430  Mismatch repair
pie03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pie00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HU724_024570
   03430 Mismatch repair
    HU724_024570
   03440 Homologous recombination
    HU724_024570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pie03032]
    HU724_024570
   03400 DNA repair and recombination proteins [BR:pie03400]
    HU724_024570
Enzymes [BR:pie01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HU724_024570
DNA replication proteins [BR:pie03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HU724_024570
DNA repair and recombination proteins [BR:pie03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HU724_024570
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 Ribosomal_L26
Other DBs
NCBI-ProteinID: QXI22148
LinkDB
Position
complement(5452780..5453385)
AA seq 201 aa
MERIAVIDFETTGLSPNSSCRATEIAVVMLENGRIVERYQSLMNAGVRVPAFIEQLTGIS
NAMLRTAPPAERVMEEVNEFVGCTPLLAHNASFDQKFWDFELGRIKRTRLQNFACSLLLA
RRLMPAAPNHKLGTLTTFAQLPHTGQAHRAMADAEMAANLMAHLAQELRGKHGVRELNHD
LLCKLQKVPAAKVGEHLQRYR
NT seq 606 nt   +upstreamnt  +downstreamnt
ttggaacgcattgcagtcatcgactttgaaaccaccggcctgtcgccgaacagcagctgc
cgcgccacggaaatcgccgtggtcatgctggaaaacggccgcatcgtcgagcgttaccag
agcctgatgaacgccggcgtgcgcgtccccgcgttcatcgaacaactgaccggcatcagc
aacgccatgctgcgcaccgcgccgccggctgagcgggtgatggaagaggtcaacgaattc
gtcggctgcacgccattgctcgcacacaacgcctcgttcgaccagaaattctgggatttc
gaactggggcggatcaagcgcacacgcctgcagaatttcgcctgttcactgctgctggcg
cggcgcctgatgccggcggcgccgaatcacaagctcggcacgctcaccacgttcgcgcag
ctaccgcataccggccaggctcaccgggccatggccgatgccgagatggcggccaatctg
atggcgcatctggcgcaagagttgcggggcaagcacggggtgcgcgagttgaatcacgac
ctgttgtgcaaattgcagaaagtccccgccgccaaagtgggcgagcatttgcagcgttat
cgctga

DBGET integrated database retrieval system