KEGG   Pseudomonas iranensis: HU724_025910
Entry
HU724_025910      CDS       T07894                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pie  Pseudomonas iranensis
Pathway
pie03030  DNA replication
pie03430  Mismatch repair
pie03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pie00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HU724_025910
   03430 Mismatch repair
    HU724_025910
   03440 Homologous recombination
    HU724_025910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pie03032]
    HU724_025910
   03400 DNA repair and recombination proteins [BR:pie03400]
    HU724_025910
Enzymes [BR:pie01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HU724_025910
DNA replication proteins [BR:pie03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HU724_025910
DNA repair and recombination proteins [BR:pie03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HU724_025910
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: QXI22399
LinkDB
Position
5733464..5734171
AA seq 235 aa
MSLFSWLRPASPVVSADLQQRLAKLPALAELSECSLREQRWVVLDLETTGLNMSKDRVLS
IGAVVIEDGAIDFRQQFERTLQCRELKLSPSVLIHGLGPNAIAAGSDPAEALLELLEFIG
DSPVLAFHAPFDQHMLGRAVKEHLGHKLQHVFLDVADIAPFLCPQAQIREAGLDEWIEWF
RLEVFERHNASADALATAELALILFSRARAQQIYSPLQLQQRLSQWKRRQQAPSF
NT seq 708 nt   +upstreamnt  +downstreamnt
atgagcctgttctcctggctgcgcccggccagccccgtggtgtcggcggatttgcagcag
cggctggcgaagctgccggcgcttgccgagctgagcgaatgcagcctgcgcgagcagcgc
tgggtggtgctggacctggaaaccaccggcctgaatatgagcaaggatcgggttctgtcg
atcggcgcggtggtgatcgaggacggcgcgatcgatttccgtcagcagttcgaacgcacc
ttgcaatgccgcgaattgaagctcagccccagcgtgctgattcatggcttggggccgaat
gcgattgccgcaggcagcgacccggcggaagcgttgctggagttgctggagttcatcggc
gacagcccggtgctggcgtttcatgcgccgttcgatcagcacatgctcgggcgcgcagtg
aaagaacacttggggcataagctgcagcatgtgtttctggatgtggcggacatcgcgccg
tttctgtgtccgcaggcgcagatccgcgaggcggggctggatgagtggatcgagtggttc
cggctcgaagtgttcgagcggcataacgcgagtgccgatgcgctggccacggcggagttg
gcgttgattctgttcagccgcgcgcgggcgcagcagatttacagtccgttgcagctgcag
cagcggttgagtcagtggaagcgcaggcagcaggcgccgtccttttag

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