Pseudomonas iranensis: HU724_026610
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Entry
HU724_026610 CDS
T07894
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pie
Pseudomonas iranensis
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pie03021
]
HU724_026610 (rpoH)
Transcription machinery [BR:
pie03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HU724_026610 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ImpA_N
UCR_14kD
IF2_N
Motif
Other DBs
NCBI-ProteinID:
QXI22534
LinkDB
All DBs
Position
complement(5890610..5891464)
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AA seq
284 aa
AA seq
DB search
MTNSLQPAYALVPGANLEAYVHTVNSIPLLTPEQERELAESLYYEQDLGAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNEEVHRVAESLGVEPREVREMESRLTGHD
MAFDPAAEADDDSAFQSPANYLEDHRYDPARQLEDADWSDNSNTNLHEALEVLDERSRDI
LYQRWLAEEKATLHDLAQKYNVSAERIRQLEKSAMNKLKLSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccaattctttgcaacctgcgtatgcgctggttccgggtgcgaacctggaagcctat
gtgcacaccgtcaacagcattccattgctgacgccggagcaggagcgtgaactggccgag
agtctctactatgagcaggatttgggggcggctcggcagatggtgctcgcccacctgcgt
tttgtcgtacacattgcccgtagctattccggctacggtctggctcaggctgacctgatc
caggaaggcaacgtcggcctgatgaaggccgtcaagcgcttcaacccggaaatgggcgtg
cgtctggtgtcgttcgccgtgcactggatcaaggcggaaattcacgagttcatcctgcgc
aactggcgcattgtgaaagtcgcgaccaccaaggcccagcgcaagctgttctttaacctg
cgcagccagaagaagcgtctggcgtggctgaacaacgaggaagtccaccgtgtggcggaa
agccttggcgtcgaaccacgtgaagtccgcgagatggaaagccgcctgaccggccatgac
atggccttcgacccggctgccgaagccgacgacgacagtgctttccagtcgccggccaac
tacctggaagaccaccggtacgacccggcgcgtcaactggaagatgccgactggagcgac
aactccaacaccaacctgcacgaagcactggaagtgctggacgagcgcagccgtgacatc
ctctaccagcgctggctggcggaagagaaagccacgctgcacgacctggcgcagaagtac
aacgtgtcggccgagcgaatccgtcagctcgaaaagagcgcgatgaacaagctcaagttg
tcgatcgccgcgtaa
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