Pseudomonas iranensis: HU724_027375
Help
Entry
HU724_027375 CDS
T07894
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pie
Pseudomonas iranensis
Pathway
pie00300
Lysine biosynthesis
pie00470
D-Amino acid metabolism
pie01100
Metabolic pathways
pie01110
Biosynthesis of secondary metabolites
pie01120
Microbial metabolism in diverse environments
pie01230
Biosynthesis of amino acids
Module
pie_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pie00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HU724_027375 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HU724_027375 (lysA)
Enzymes [BR:
pie01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
HU724_027375 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QXI22680
LinkDB
All DBs
Position
6054266..6055513
Genome browser
AA seq
415 aa
AA seq
DB search
MDAFNYRGGELFAEGVALSAIADRFGTPTYVYSRAHIEAQYLAYADALAGMPHLVCFAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGNADKIVFSGVGKTRDDMRRALEVGVH
CFNVESTDELERLQVVAAELGVRAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYVRAAHLPNLEVVGVDCHIGSQLTTLPPFIDALDRLLDLVDRLGDCGIHLRHIDLGGGL
GVRYRDEEPPLAADYIKAVRERLDGRDLALVFEPGRFIVANGGVLLTQVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVTAVKPRDSAARKYDIVGPICETGDFLAKDRELALEEGD
LLAVHSAGAYGFVMSSNYNTRGRAAEVLVDGDQVFEVRRRETVAELFAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttttaactaccgtggcggggaactgttcgcggaaggtgtggcgctgtccgcc
atcgccgaccgcttcggcacgcccacctatgtctactcgcgcgcgcacatcgaagcgcag
tatctggcctacgccgatgcgctggccggcatgccgcatctggtctgcttcgcggtcaaa
gccaactccaacctcggtgtactgaatgtcctggcccgtctcggcgccggtttcgacatc
gtttcccgcggcgagctggaacgtgtactggccgcaggtggcaacgccgacaagatcgtt
ttctccggcgtcggcaagacccgtgacgacatgcgtcgcgccctcgaagtcggcgtgcac
tgcttcaacgtcgaatccaccgacgagctcgagcgcctgcaagtagtcgccgccgagctg
ggtgttcgcgccccggtttcgctgcgcgtgaaccctgacgtcgatgccggcacccacccg
tacatttccaccggtctgaaagagaacaagttcggcatcgccattgccgacgccgaagac
gtgtacgtgcgcgccgcgcatctgccgaacctggaagtggtcggtgtcgactgccacatc
ggttcgcaactgaccacgctgccgccattcattgacgccctggatcgcttgctcgatctg
gtcgaccgtctgggcgattgcggcattcacctgcgccacatcgatctcggtggcggcctg
ggcgtgcgttatcgcgatgaagagccgccgctggctgccgactacatcaaagccgtgcgc
gagcgtctcgacgggcgtgatctggcgctggtgttcgaaccgggtcgtttcatcgttgcc
aatggcggcgtgctgctgacgcaggtcgaatacctcaagcacaccgagcacaaggatttt
gccatcgttgacgcggcgatgaacgacctgatccgcccggcgctgtatcaggcgtggatg
gacgtcaccgcggtgaaaccgcgcgacagtgctgcacgcaagtacgacatcgtcggcccg
atctgcgaaaccggcgacttcctcgccaaggatcgcgagctggcgctggaagaaggcgac
ttgctggcagtgcattcggccggtgcctacggtttcgtcatgagctccaactacaacact
cgcggccgtgccgctgaagtgctggtggatggtgatcaggtttttgaagtgcgtcgccgc
gaaaccgtggccgagctgtttgccggcgaaagcctgctgccggagtaa
DBGET
integrated database retrieval system