Phytophthora infestans: PITG_00036
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Entry
PITG_00036 CDS
T01333
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
pif
Phytophthora infestans
Pathway
pif03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PITG_00036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pif03009
]
PITG_00036
Ribosome biogenesis [BR:
pif03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PITG_00036
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
U3_assoc_6
UTP6_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
NRDE-2
DUF2594
Motif
Other DBs
NCBI-GeneID:
9476539
NCBI-ProteinID:
XP_002908671
UniProt:
D0MSQ1
LinkDB
All DBs
AA seq
671 aa
AA seq
DB search
MADKVQITMEKMVPELEDLQARKIFSADEIRQIVDKRRGFEYSLQRVPLRKIDAMRYIEY
ELKLDALRAARKERLGLVKVSLGDTAGTKRVHNIFDRVLFKHRGSVELWLQYVAFCKREG
SSRVLSAVFSRALQSHPRSAELWIEAASYEFGVNLNVDSARVLMQRAIRLNKHNQKLWLE
YFRLELLYVQKLAMRRQVLRLDEEVPKPVDDDGSTALIDELPEEKDAKEEISEQMAAKMN
ARKLVLQGAIAKIVYTNAIAAIPDDVAFRLKFVEIRDLFGSLTAAELSDFIIQDCLETFP
KSEKVHATKALRPLLTVEDSAASHSGESSEVDSADMSEAERQAELLVVQNFETSITQLDS
VSMKEFFAEWMVARLASSSQTAFLLEYARAKLKEFAFSETCASSPSLAIKYVDLTHRTDG
TNDAFMVVRKICDECQPQSSEMWLLQSQLLLHSDYEEETTSRSPSSKRRRTSRSSYSKTV
NSNPLAAAVAVLKTALTKIATEDYDAQFAVHSRLLQLLIGIAEAASVIEKAFKNALGAQK
RGSSHWSDLRQQYVTWTASATSQRSLEQTRALYTKFMVDEQFLPSSETYSFLLLCVDIET
SATSVDVPQVRKLFEKLVELFGSTHEDVWVQYVRCLSERLGLFADATRVQQRALRVWKES
TALMQYAFAGL
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaggtgcagatcacgatggagaagatggtccccgagctggaggacttgcag
gctcgcaaaatcttttcagcggacgagatccgtcagatcgtggataagcgtcgaggcttc
gagtactcgctgcagcgcgtgccactgcggaaaatcgacgccatgcgctacatcgagtac
gaactaaagctggacgcgctacgagccgcacgaaaggagcgtttgggtctcgtcaaggtc
tcgctcggcgatactgcgggcaccaagcgcgtgcacaacatcttcgaccgcgtgctgttc
aagcaccgtggcagcgtcgagctctggctgcaatatgtggcgttctgcaagcgagaagga
agcagtcgagtgttgtccgctgtgttctccagagcgctgcagtcgcacccacgcagcgct
gagctctggatcgaagccgcgtcctatgaattcggcgtcaacctcaacgtggactcggcg
cgtgtgctcatgcagcgtgcgattcgtctcaacaaacataaccagaagctgtggctggaa
tacttccgtctggagctgctgtacgtgcagaagttggcgatgcggcgtcaagtgctgcgt
ctggacgaggaagtaccgaagcctgtggatgacgatggatccaccgcgctgattgacgag
cttccggaagaaaaagacgctaaagaggagatttcggaacagatggcagccaagatgaac
gctagaaagctcgttctgcagggtgccattgcgaagattgtgtacacgaacgccattgcg
gcgattccggacgacgtggcgttccgactaaagtttgtggagattcgtgaccttttcggc
tcactcacagctgcggaactgtcagactttatcatacaggactgcttggagactttcccg
aagagcgaaaaggtccacgctactaaggcgctgcgtcctcttctgacagtggaggacagt
gccgcttctcactctggagagtcttcggaggtggatagtgctgatatgtccgaggctgag
cgtcaagctgagctgttggtcgtgcagaacttcgagacaagtatcacgcagctggactcg
gtctccatgaaggaatttttcgccgagtggatggtcgctcgtctggcctcttccagtcaa
acagccttcttgcttgagtatgcgcgcgccaagctgaaagagtttgctttctcggagacg
tgtgcttcatcgccgtctctcgctatcaagtatgtcgatctgactcaccgcacggacggt
acgaatgacgcgtttatggtcgtgcggaagatctgcgacgagtgtcagccacagtcgtcc
gagatgtggctgctgcagtctcagctcctactccactcggattacgaagaagagaccaca
agtcgatcgccttctagtaagcgacgtcgcacctcgcgcagctcgtattcgaagaccgtt
aacagcaaccccttggctgctgccgttgcggtactgaagacagctttgaccaagattgct
acagaggattacgacgcacagtttgctgttcacagtcgcctcctccagctgcttattggc
attgcagaggctgcaagcgtcatcgagaaggcatttaaaaacgcacttggcgctcagaaa
cgtggctcgtcacactggagtgatctacgtcagcagtacgtgacttggactgctagcgca
acttctcaacgctcgctggaacagactcgtgccttgtacaccaagttcatggtggacgag
cagttcctgccttcctccgagacatactcgttcctgttgctgtgcgtggacatcgagact
tctgcgacgtcagtggatgtgccgcaggtgcgaaagctgttcgagaaactcgtggagctg
ttcggctcgacccacgaggatgtctgggtgcagtatgtgcgctgtctgtctgagcgtctg
gggcttttcgccgacgccacgcgcgtgcaacagcgagcactgcgcgtgtggaaggaatct
acggcactcatgcagtacgccttcgcgggcctgtag
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