Phytophthora infestans: PITG_00142
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Entry
PITG_00142 CDS
T01333
Name
(RefSeq) ribosome biogenesis protein NEP1, putative
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
pif
Phytophthora infestans
Pathway
pif03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PITG_00142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pif03009
]
PITG_00142
Enzymes [BR:
pif01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
PITG_00142
Ribosome biogenesis [BR:
pif03009
]
Eukaryotic type
90S particles
Other 90S particles
PITG_00142
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EMG1
ACS_CODH_B_C
Motif
Other DBs
NCBI-GeneID:
9476736
NCBI-ProteinID:
XP_002908769
UniProt:
D0MSZ9
LinkDB
All DBs
AA seq
215 aa
AA seq
DB search
MSASKEDVKRRQVIVILEQAALETVKTSKGYQLLNCDDHKGIHKKLNREASQSRPDILHQ
ELMALLDSPLNKAGYLKATKGVLVEVSSQMRVPRTYKRFAGLMVQLLHTLKIRSSDGNHT
LLNVIKNPVTKHLPANCKKYALTRTGTLVNPWEWVESLPKDEPVVFIFGAMAHGHISKEN
CNYLDDTISISEYPMSGAQAICRLLNGFERHWGIL
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgagcaaggaggacgtaaagcggcgccaggtgatcgtgatcctcgagcaggca
gctctggagacggtcaagacgtcgaagggctaccagctgctcaattgtgacgaccacaag
ggcatccacaagaagctgaaccgcgaagccagccaatcgcgtccggacattctgcaccag
gaactcatggcgctgctcgactctccactaaacaaggctggctatctcaaggccacaaag
ggagtgcttgtcgaagtgagctcgcagatgcgcgtgccccgcacgtacaagcgcttcgcc
ggtctcatggtgcaattgctacacacgctgaagatccgttcgtccgacggcaatcacacg
cttctgaacgtgatcaagaaccccgtgaccaagcacctaccagctaactgcaagaagtac
gcactaacgcgaactggtacgctcgtgaacccgtgggagtgggtggagtcgctgcctaag
gacgagccggtcgtgttcatcttcggtgccatggctcacggccacatttccaaggagaac
tgcaactacctggacgatactatttcgatctccgagtacccgatgagcggtgcccaggcc
atttgccgtctgctgaatggcttcgagcgtcactggggcatcttgtaa
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