Phytophthora infestans: PITG_00220
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Entry
PITG_00220 CDS
T01333
Name
(RefSeq) general transcription factor IIH subunit, putative
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
pif
Phytophthora infestans
Pathway
pif03022
Basal transcription factors
pif03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PITG_00220
09124 Replication and repair
03420 Nucleotide excision repair
PITG_00220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pif03021
]
PITG_00220
03400 DNA repair and recombination proteins [BR:
pif03400
]
PITG_00220
Transcription machinery [BR:
pif03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PITG_00220
DNA repair and recombination proteins [BR:
pif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PITG_00220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
ATP-synt_DE_N
Motif
Other DBs
NCBI-GeneID:
9476894
NCBI-ProteinID:
XP_002908844
UniProt:
D0MQ89
LinkDB
All DBs
AA seq
293 aa
AA seq
DB search
MAQANRAISTEANEGLLVLVIDTNPVHWFTNGGSAADRAGLQQLISSTLVFVNSYLLLHR
SNRIVIIAAHAGKSAMLYPDPEQDDTTGSAEQAAKVNAGVLQRMQQLSDAPLDPATPNQT
AIAASLSRSLCFINRAINEEPDLRPRILVIQKSPDVSEHYIAIMNGIFSAQKKSVAVDAC
ILATEHSSFMQQAAYLTGGIYYKPNDHSGLLQYLISIYLPDPSMRKLLKLPSQDSVDFRA
MCFCHREVISTAYVCPVCLSLFCEFRPICSTCGIRSHIQPKKNGLHKKRLRVD
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagcgaatagggcgatcagcaccgaggccaatgaagggctgctagtcttggtg
atcgacaccaaccccgtgcactggttcacgaatggcggtagtgcggcggaccgcgccggg
ctgcagcagctgatctccagtacgctcgtattcgtcaactcgtacctgcttctacaccgc
agcaatcgcattgtcatcatcgcggcccacgccggcaagagcgcaatgctgtacccggat
ccagagcaggacgacaccactggaagtgccgaacaggctgccaaggtcaatgctggtgtc
ctgcagcgtatgcagcagctcagcgacgcccctttggaccctgccacgcccaaccaaact
gccatcgctgcgtcgctatcacgttcactatgcttcattaatcgtgctattaacgaggaa
ccggatttacgaccacggatcttggtcatccagaaatctccggacgtttcggagcactat
atcgccatcatgaacggcattttttcagctcagaagaagagtgttgcagtggacgcctgc
atcctcgcgacggagcactcgtcgttcatgcaacaagctgcgtatcttacaggcggcatc
tactacaagccaaacgatcatagcggactattgcagtatctgatctccatctatctacca
gatccgtccatgcgcaaattgttgaagttgccatcgcaggactcggtggacttccgtgcg
atgtgcttttgtcaccgcgaggtcatctctacggcgtacgtctgcccggtgtgtctgtcg
ctattttgcgagttccgacccatctgctcaacttgcggtattcgtagtcacatccagcct
aaaaagaatggtttgcacaagaagcgtctacgggtggattaa
DBGET
integrated database retrieval system
