Phytophthora infestans: PITG_02482
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Entry
PITG_02482 CDS
T01333
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
pif
Phytophthora infestans
Pathway
pif03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PITG_02482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pif03041
]
PITG_02482
Enzymes [BR:
pif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PITG_02482
Spliceosome [BR:
pif03041
]
Complex C
Other components
Step II factors
PITG_02482
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
S1
DEAD
AAA_22
AAA_19
Cas3-like_C_2
GIPC1_GH2
nSTAND3
AAA_30
TsaE
PhoH
OB_RRP5_4th
AAA_7
NB-ARC
Motif
Other DBs
NCBI-GeneID:
9469929
NCBI-ProteinID:
XP_002907406
UniProt:
D0MWF7
LinkDB
All DBs
AA seq
1158 aa
AA seq
DB search
MEKLQELSLVSKVCQALENHLGMSDKTLAEFVIDLVRSSSSCTAFLASIKKDELPLPPAL
AENLYRIVQTMAPRKMKQVGGSAADAKRKSKRHQIRDDEQLTAADIAGASVKDDKDDKKP
TSTERDDRKSDDRSRTRDRSRDRDRYGRDRSRGRDEDRGRRGRRSRSRSRSEGRRRDRRD
RDRDRSRGRRRDDPPRELELYGIYDGRVAKVMDFGVFVELEGFSREKKEGLVHVSNLSAN
RVSNVKEFAKRGDRVKVKLISISGAKLSMSMRDVDQRTGKDLMPQRSSDGAERARQENRS
SDSRSWINPSAPGMQSSQQLDEDDSKPQRAAKRMSSPERWEVQQLINSGVLSVEDYPTFD
EEHGMLNTEATEEDFEVELNEDEPVFLRGQTQMSREISPVKIVKNPDGSMQRAAMTQSNL
AKERRELRQTQANQLIDSIPKDLNRPWEDPMPDAGERHFAQELRGINMGSTFELPEWKQK
SVGKNLSYGIVSNKTILEQRESLPVFKLKRQLMKAIADNQVLVVIGETGSGKTTQMTQYM
AEMGLTSTGIIGCTQPRRVAASSVAKRVAEEFGCELGQEVGYSMRFEDVTSPETVIKYMT
EGMLLREYLADSTLSKYSALMLDEAHERTINTDVLFGLLKDLVRTRKDLKIIVTSATLDA
EKFSRYFFDCPIFTIPGRTFPVEILYTKEPELDYLDACLLCVMQIHLSEPEGDILLFLTG
QEEIDTACEVLYQRIKALQERALAPELIILPVYGALPSEMQSRIFEPAPKGSRKCVVATN
IAEASLTIDGIYYVVDPGFCKQNAFNSKIGMDSLVVVPCSQASARQRAGRAGRTGPGKCY
RLYTENAYKNEMLPTTVPEIQRANLGSVVLQLKAMGINDLMGFDFMDPPPQDALVMALEN
LYALGALDDEGLLTRLGKKMAEFPVEPKNAKVLLTSVVLGCAEEVLTIVAMLSVESVFFR
PKEKQAQADQKKAKFHQPEGDHLTLLGVYEAWANSKFSNPWCYDNFIQARAIRRAQDVRK
QLLSILDRYKMDVVSCGKNYNKVRRAIVAGYFANTAKKDPQEGYRTMVEGQPVYIHPSSA
LFNKSPEWVLYHELVLTTKEYMRNIMTIEPKWLVELAPAFFKKGDPTKLSKRKRNEKIEP
LFDRFNPPDSWRLSKRRG
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atggagaagctacaggagctgagcctcgtgtccaaggtgtgccaggcactagagaaccac
cttggtatgagtgacaagacgctggccgagtttgtgatagacttagtgcgcagcagctcg
agctgcaccgccttcctagcatccatcaagaaagacgagctgccgttgccccccgcccta
gctgagaatctctaccgcatcgtgcagacaatggctccacgcaagatgaagcaggtgggg
ggttcggctgcggatgccaagagaaagagcaagaggcaccaaattcgagacgacgagcag
ctcacagctgcggatatcgcaggagcgtccgtcaaggacgacaaggacgacaagaaaccg
acgtctaccgagcgtgatgataggaagagtgatgatcgctctcgaactagagaccgatca
cgagaccgcgatcgctacggacgtgacagaagccgcggacgcgatgaagatcgcggcagg
agaggcagaaggtcaagatctcggtctcggtcggaaggcagacgacgcgatcgacgtgac
agggacagagaccgcagtcgcggtcgcaggagagatgatccacctagagaactggagcta
tacggcatctatgacggtcgtgtcgcgaaagtaatggactttggtgtctttgtagagctg
gaggggttctcaagagagaagaaggaaggtcttgtccacgtctccaacttgtctgccaat
cgtgtaagtaacgtcaaggagtttgcaaagcgcggcgaccgtgtcaaggtgaagctcatc
tcgatctcaggagccaagctgtcgatgtcaatgcgcgatgtggatcaaagaactggaaag
gatctgatgccgcagcgctctagtgatggtgccgagcgtgcacgtcaagagaacaggtct
tccgactcacgttcgtggattaacccatctgcaccgggtatgcagagctcgcagcaactg
gatgaagatgacagcaagccacagcgtgctgcaaagcgcatgtcgtcacctgaacgatgg
gaagtccagcagcttattaactccggagtgctgtcagttgaggactatccgacgtttgac
gaggagcacggtatgctcaacacggaagccacggaagaagactttgaagtggaattaaat
gaggacgaacctgttttcctgcgtggtcagacgcagatgagtcgagagatatcccccgtg
aagatcgtcaagaatccggacggctccatgcagcgtgccgccatgacgcagtcgaactta
gcgaaggaacgtcgtgaattacgccagacacaagcgaatcagttgattgattccatcccg
aaggatcttaatcgaccgtgggaagatcccatgcctgacgctggagagcgacactttgct
caggaactgcgtggcatcaacatgggatcgacattcgagctgccagagtggaaacaaaag
tccgtggggaagaacttgtcctatggtattgtgtcgaacaagaccattctggagcaacgt
gagagtcttccggtattcaaactgaagcgtcaactgatgaaggctatcgcggataatcaa
gtcctggtggttattggtgaaactggatcggggaaaaccacgcagatgacgcagtatatg
gctgaaatgggcttgacttctaccggtattatcggctgtactcagccgcgtcgtgttgct
gcttcatccgtggcaaagcgtgtggccgaagagtttggctgtgagcttggacaagaagtt
ggttactcgatgcgattcgaagacgtcaccagtcccgagacagtgatcaagtacatgact
gaaggtatgctgctgcgagaatacctggctgactcgactctgtcaaagtacagtgctctg
atgctcgatgaagcccacgagcggacaatcaacacggacgttctgtttggactgctgaag
gatcttgtacgtacacggaaagacctcaagattatcgtgacgtccgcaactctggatgct
gaaaagttctctcgatactttttcgactgcccgatttttacaatcccaggtcgtacgttc
cctgtagagattctgtacacgaaggaaccggagttggactatctggacgcgtgtctgctg
tgtgtgatgcagatccatttatccgagcccgaaggagatattctgttattcttgacgggc
caagaagagatcgatacagcgtgtgaagttctgtatcaacgtatcaaggcgttgcaagag
cgtgcactagctccggaactcatcattctgccagtatacggtgcgctgccttcggaaatg
cagtcgcgcatttttgaaccagcacccaagggctctcggaagtgtgtggtggctaccaat
atcgcagaagcttcactgacaattgacggcatctactacgtcgtggaccctggtttctgc
aaacagaatgccttcaactcgaagatcgggatggattctcttgtggttgtgccgtgctca
caagcctcagctcgtcaacgtgccggacgcgctggtcgtacaggccccggaaagtgctat
cgattgtataccgagaatgcgtataagaacgagatgttaccgaccaccgtgccagagatc
cagcgtgcgaatctcgggtcggttgtgcttcaactgaaagccatggggatcaacgatctt
atgggtttcgactttatggacccgccgcctcaagatgctcttgtcatggcactggagaac
ttgtacgcattaggcgcgttggacgatgaaggtctgttaacaaggttgggcaagaagatg
gccgagttcccagtcgaaccgaagaacgcgaaggtgttactgacttccgtggtacttggc
tgtgccgaggaagtgctgactatcgtggcgatgttgtctgtggagtcggtcttcttccga
ccaaaggagaaacaggctcaggctgaccagaagaaggcgaagttccaccaacctgaaggc
gatcacttaactttactgggagtgtatgaggcttgggcgaactccaagttctccaaccca
tggtgctatgataacttcatccaagcacgcgctatccggcgtgctcaagacgtccgcaaa
cagctgctgtccattcttgatcgatacaaaatggatgtggtttcctgcggcaaaaactac
aacaaggttcgacgtgctattgtggccgggtacttcgccaacacggcgaagaaagacccg
caagagggataccgcactatggttgaaggccaacctgtgtacattcatccatcgagtgca
ttgttcaacaagagtccagagtgggtgctttaccatgagctggtcctcaccacgaaggaa
tatatgcgcaacatcatgacgattgagcccaagtggcttgtggaattagcccctgcgttc
ttcaagaagggcgaccctaccaagctatccaagcgcaaacgtaacgagaagatcgagccg
ctctttgaccgcttcaatccacccgattcctggcgtcttagcaaacgtcggggataa
DBGET
integrated database retrieval system
