Phytophthora infestans: PITG_02856
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Entry
PITG_02856 CDS
T01333
Name
(RefSeq) DEAD/DEAH box RNA helicase, putative
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
pif
Phytophthora infestans
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pif03019
]
PITG_02856
03041 Spliceosome [BR:
pif03041
]
PITG_02856
03036 Chromosome and associated proteins [BR:
pif03036
]
PITG_02856
Enzymes [BR:
pif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PITG_02856
Messenger RNA biogenesis [BR:
pif03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
PITG_02856
mRNA cycle factors
Common to processing body (P body) and stress granule
PITG_02856
Spliceosome [BR:
pif03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
PITG_02856
Chromosome and associated proteins [BR:
pif03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
PITG_02856
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
9476950
NCBI-ProteinID:
XP_002907739
UniProt:
D0MXE0
LinkDB
All DBs
AA seq
639 aa
AA seq
DB search
MAEGRSTYVPPHMRGSGGGGDRGDDDRRGGFDDRRGGYGGNERRGGSRERGYGNRSGSRE
RGDGPPRATNSRWSGFESERRDDRRGGYGDDRRGGYGGGGGYGRGGGGGGGARVNELGYH
GDVRRNERLEHELFGDAKSSGINFDKYDDIPVETSGENVPDPVTEFAEEQLGPEVIRNLE
LCKYSKPTPVQKYSIPIGLAGRDMMACAQTGSGKTGGFLFPTLAAMLRVGGTPPPDVGHG
RSRKIFPAGLILSPTRELASQIHDEAKKFCYCTGIAPVVIYGGAEVGRQLRELERGCDLL
VATPGRLVDLMERGRISLSCIRFLILDEADRMLDMGFEPQIRRIVEQEDMPRERQTFMFS
ATFPCEIQRLASDFLRDYIFLTVGRVGSASKDVKQTVEYIEQYDKEDYLVRFLNQVQDGL
ILVFVETKRGADFLEDMLCREGFPATSIHGDRSQREREQALASFKSGRTPVLVATDVAAR
GLDIDGVTQVINFDLPNNIDDYVHRIGRTGRVGNVGYALSMMNEKNRNIAREMYELMAEN
GQEIPAFLDQMASSGFRGGGRSGRGGRGGRGGSRFGAKDFRNEERGGGGNRGGSGGYGGG
FGGGGGYGGGYGGGGGGGGGYSGGGSRGGGSRSEDNSAW
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggaagatctacatacgtgccgccgcacatgcgtggaagcggcggcggtggc
gaccgcggcgacgacgatcgtcgtggaggctttgacgaccgtcgcggcggctacggcggc
aatgaacgtcgaggcggatcacgtgaacgcggctacggaaaccgcagcggctctcgcgag
cgtggcgatggccctcctcgtgcgacgaactcgcgatggtctggatttgagtcggaacgt
cgagacgaccgccgaggaggctacggtgacgaccgtcgtggtggttacggaggcggaggc
ggctacggtcgcggcggcggcggcggtggcggtgcccgcgtgaacgaactaggctaccac
ggcgacgttcgccgcaacgaacgcctggagcacgagctgttcggtgacgccaagtcgtcc
ggtattaactttgacaagtacgacgacattccagttgagacgagcggcgagaacgtgccc
gatccggtcaccgaattcgcggaggagcaactcggccccgaggttatccgcaacctggag
ctgtgcaagtactcgaagcccacacccgtgcagaaatactcgatcccgattggtctggcc
ggacgtgacatgatggcatgtgcccagacaggttctggtaagacgggtggctttctgttc
cccacgctagcggccatgctgcgtgtgggcggcacgcctccacccgacgtcggccacggc
cgctcgcgcaagattttcccggccggtttgatcctgtcgcccacgcgtgagctggcgtct
cagatccacgacgaagcgaagaagttttgctactgcacgggtatcgcgcccgttgttatc
tacggtggtgcagaggtcggccgtcagttgcgtgagttggaacgcggttgcgacctgctt
gtggccactcccggccgccttgtggacctgatggagcgtggccgtatctctctgtcatgc
atccgcttcttgattctggacgaggccgatcgaatgctggacatgggtttcgagccccag
attcgccgcattgtcgagcaggaggacatgcctcgtgaacgtcagaccttcatgttcagt
gccacgttcccgtgtgagatccagcgcctcgcgtccgacttcctgcgtgattacattttc
ctgacggttggccgtgtcggctccgcttcgaaggatgtgaagcagacagtggagtacatt
gagcagtacgacaaggaggactaccttgtgcgtttcctgaaccaggtgcaggatggtttg
atcttggtgttcgtggagaccaaacgcggcgctgatttcctggaggacatgctgtgccgt
gaaggcttcccggccacgtcaatccacggtgaccgctcgcagcgtgagcgtgaacaggcc
ctggccagctttaagtcgggccgtacgcccgtgctggtggccactgatgtggctgcccgt
ggtctagatattgatggtgtgactcaggttattaactttgacctgcccaacaacatcgac
gactatgtccaccgtatcggccgtaccggtcgtgtgggtaacgtgggttacgctctctcg
atgatgaacgagaagaaccgtaacatcgctcgtgagatgtacgagctgatggcggagaac
ggccaggagatcccggccttcctggaccagatggccagcagcggattccgtggtggaggc
cgcagtggccgtggcggccgtggtggtcgtggcggctctcgcttcggtgctaaggatttc
cgaaacgaagagcgtggcggtggtggaaaccgtggtggcagtggcggctacggcggcggc
ttcggtggaggcggtggctatggcggtggctacggaggcggtggcggcggcggtggcggc
tacagtggtggcggcagtcgcggtggtggctcccgcagcgaagacaacagcgcctggtaa
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