Phytophthora infestans: PITG_03246
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Entry
PITG_03246 CDS
T01333
Name
(RefSeq) hypothetical protein
KO
K14319
Ran GTPase-activating protein 1
Organism
pif
Phytophthora infestans
Pathway
pif03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PITG_03246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pif03019
]
PITG_03246
Messenger RNA biogenesis [BR:
pif03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
PITG_03246
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
LRR_14
Motif
Other DBs
NCBI-GeneID:
9464650
NCBI-ProteinID:
XP_002906326
UniProt:
D0MZR4
LinkDB
All DBs
AA seq
847 aa
AA seq
DB search
MATSKTVLSFEGERELVTEARAHELVQTYANEEAEPPAFTHITLRNKSYTIEAARVIAAF
FSRLEARGAFAQLTSVDFADMIAGRPEDEALQVLSTLCDALSAIKTLTRIDLSDNALGEK
GVRACFGLLQNQEQLQHMYFCNNGISAAAAGVIAQEVLLFRGQDTPTKLETFHFYNNMSG
DGGAIALAKLLPLSPALKDLRFSATRAQREGSLTFAKALASLQKLEKLDLSDNTFKAQGG
EAIAAAVKNMPNLVEINLRDAATEDDGLVAIVDALHESGAAKWLTALDVSGNDLTAESMP
ALGHMLRDSAALRVLQVEENEIGSKGAKAIAKALKAGAPALEKVVANVNEIGASGAIAFV
KVVADKKAFVKLEIDGNQISADGVASIESLLESMGKSDLLGSLEDNDEDEEEEEDDDEEE
TAAVKDVTAMLDKVTISEASFEFENKSREVVDAARAEQLLEAAGIKVNERSPLHFKSISL
RGKSYTDSGAKVIADALLSRLQSDLKVVDLADVIAGRPEDEALRVLSVMCRALRGHGLDE
IDLSDNALGEKGVRACFDLLIPQPTLRRLLFCNNGISAAAASVIAQEIVLQNGKDAQSTL
EEFHFYNNMSGHDGCVAVANVLAQCKKLTLLRYASARAGPEASEQMARSVNTHLRDLKSL
DLSDCSFEEDGATQLAEAISKQPSLQYLKLRDALLCAEGATKVVKALASSKIQLVELDLS
GNELADDGIVSLAPLLKFQSQLKVLRLDENEVTSEGLKDFVAALSSGSLPALEELSLCGN
EITAKGAIAVVDTFVPTRTALARLELDTNMISDKGVEHIKASLAKQGKTTILGSLEENDG
DEESDDE
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctccaagaccgtgctgtccttcgagggcgagcgcgagctcgtgacggaagca
cgtgcccacgagttggtgcaaacatacgcgaatgaagaggcggaaccgccggccttcacg
cacatcacgctgcgcaacaagagctacaccatcgaggcagcgcgagtgattgccgcgttc
ttctcgcgtctggaggctcgcggtgccttcgctcagctcacgagcgtggactttgccgat
atgatcgctggtcgccccgaggacgaggcgcttcaagtgctgtccacgctctgcgacgcg
ctgagcgccatcaagacgctcacgcgcatcgatctaagtgacaacgcactaggcgagaag
ggcgtgcgtgcctgcttcggcctgttgcaaaaccaggagcagttgcagcacatgtacttc
tgcaacaacggtatctcggctgcggctgcgggtgtcattgcacaggaggtgctgctgttc
cgcggtcaggacacccccaccaagctcgagaccttccacttctacaacaacatgagcggc
gatggtggtgccattgcgctggctaaactactgccgctatccccggcactcaaggatcta
agattttcagccactcgagctcagagggagggaagtctaacgtttgctaaggctctggcc
tcgcttcaaaagctcgagaaacttgacctaagcgacaataccttcaaggcccagggaggt
gaggctatcgctgcagcagtcaagaacatgcccaatttggtggagatcaatctccgtgac
gctgccactgaggacgacggcttggtggccatcgtagatgcgctgcatgagagcggcgct
gctaagtggcttacggcactggatgtgtctggtaacgacctgactgctgagagtatgccg
gcgctgggacacatgctgcgtgatagtgctgcgttgcgtgtgctgcaggtggaggaaaac
gagatcggttccaagggcgctaaggccattgccaaggctctgaaggctggagcgccggcg
ctggagaaggtggtcgctaacgtgaacgaaattggcgcgtctggcgcgattgcatttgta
aaggttgtcgctgacaagaaggcgttcgtgaaactggagatcgatggcaaccagatctcg
gcggacggtgtggctagcatcgagtcgctcctggaaagcatggggaaaagtgacttgctg
ggatcgctagaagacaacgacgaggacgaagaggaggaagaggacgacgatgaagaggag
actgctgcggtgaaggacgtgacggctatgcttgacaaggtgacgatttctgaagcaagc
tttgagttcgagaacaaaagtcgtgaagttgttgatgctgctcgtgccgagcaactgctg
gaggctgctgggattaaggtgaacgagcgttcgccgctgcactttaagtctatttctctg
cgcggaaagagctacaccgactctggtgcaaaggtcatcgcggacgcgttgctgtcgcgc
ctacaaagcgatctcaaagtggtggacttggctgatgtgatcgctggccgcccagaagac
gaggctctccgggtcctctccgtcatgtgccgcgcacttcgtggccacggtctggatgaa
atcgacttgagtgataacgcacttggagagaagggtgtgcgcgcttgctttgacctcctg
atcccacagccgacgctccgccgtctcttgttctgcaacaatggcatttccgctgccgct
gccagtgtgatcgcccaggagatcgtgctgcagaatgggaaggatgctcaatcaacgctg
gaggagtttcatttttacaacaacatgagcggacacgacggctgtgtagcggtggctaac
gtccttgcccagtgcaagaagctgacgcttctgcgctatgccagtgcccgtgcaggcccg
gaggcgagcgaacagatggctcgcagcgtcaatacacacctgcgtgaccttaagtcgctc
gacttgagcgattgctcgttcgaagaagacggcgccacgcagctcgccgaagccatcagc
aagcagccgagtcttcagtacctcaagctgcgcgatgctttgctgtgtgctgagggtgct
acgaaggtggtgaaggcgttagcaagtagcaagatccaattggtggagctggatctgtcg
ggtaacgagttggcggacgacggtatcgtgtcccttgctcctctgctgaagttccaatcg
cagctgaaagttctgcgcctcgatgagaacgaggtaacgtcggagggcctgaaggatttt
gtggcggctttgagctcaggcagcctcccggcccttgaggaactgtctctgtgcggcaac
gagatcacagccaagggagcgattgcagtcgtggacaccttcgtgcctacgaggacggcc
cttgcacgtctggagctagacaccaacatgatctctgacaaaggcgtggagcacatcaag
gcctcgctggctaagcaaggtaaaaccaccattttgggctcgctagaggaaaacgacggg
gacgaggagagcgacgacgagtag
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