Phytophthora infestans: PITG_03348
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Entry
PITG_03348 CDS
T01333
Name
(RefSeq) RNA polymerase-associated protein CTR9
KO
K15176
RNA polymerase-associated protein CTR9
Organism
pif
Phytophthora infestans
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pif03021
]
PITG_03348
Transcription machinery [BR:
pif03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
PITG_03348
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_16
TPR_14
TPR_7
TPR_8
TPR_6
TPR_17
TPR_12
ANAPC3
TPR_11
TPR_CcmH_CycH
TPR_10
ARM_TT21_N
TPR_9
ARM_TT21_C
TPR_Slam
ARM_TT21_2nd
ARM_TT21
YfiO
ARM_TT21_5th
ChAPs
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
9464505
NCBI-ProteinID:
XP_002906421
UniProt:
D0N009
LinkDB
All DBs
AA seq
1166 aa
AA seq
DB search
MSDAEEEPSNQRALLIPVKNSEQAVEVFVDELPEDVNDIIDILRAEVAPLDVWLQFAVEY
YNQGHVAQFQEILAVASEPGIEEIYKDNASRMCRIKFFIALASHAVNAMWNEEDEKKREA
ISQRAVGFFQRADRLDHQHPMTLVGKALMFMAKNEDDRADRFIKSVLISNKTNLPAILGK
ALLLYRKKQYKDAKKLYLEAIKLHPRSPQAANMRMCFAYCCYHLGAVEKARAVMKYTASL
DETNVDAVIASALWQLASQSREERAVSIRDESSRFMIMIHHAHAIDKTNPTVLNHLANHY
FSQWIPLPCTVSVVRGSAVVATSKDISSEVSPGQIICIGDKYVAYISRDEDAVSSSGLKL
DGPYRDESATATNIARKDYDKMFTLAGNAFHSTKIPEIRSESCYLMGRGCHAQGKYKDAY
SYYFNAGRLWPKFVLPWFGLAQMYYERKEFTKAASYLEKANKAYPENVEILSLLGDVYGK
LGKKDEAVVLLRRVVELEPGNVEALIGTAELLHGSPERKDQIIAISSYIAAEKVMNNASE
RVPMEVYVNLGVLQQRVGKTSDAITCFKKALTQLGDDSSANEESKSEEADALAEEASTPK
PTEANITILYNMGRVYEEMGNRDRAKKLYDVILEVFPRYTDCLLRLGCMLRDRGQEAEAI
KTFDKVLEVDPTCAEACLLQGNIYLKKREWVFAQKKYEKVMGMPGLKNDPYAFLSMGNIF
MSNLGEKNRYTKNMSLSEVYYKKTLASHPHNIYAANGLGIMIAEKGNFELAKQIFSQVRE
ASPDMPDAWINLAHIFVAEERYQEAIQLYTVCLTKCYQGQDLEVLLYLAKAYYESKDFPS
CIATLSRALHMYPNDLRLWYNTGLAQEDYAVMTLGQETTVTRSGSGSAVPQLRTMADVQR
AILDLKRAQRIFRFLLQQSEASASSSNSEKKKHHNSLPFDKEKVSDHEKFCGDTLTKASY
HLEFERQKEEKRRLEIEAQRKLLREYEERVAREQEEVRVKEEDTRRRHEDIRLKQDERLK
KLHEGWSVREREEEEKKVVKKKGGKKRKKAEDEDGGFIDDGEDEVDEDGDNSMSIEDMKN
RNSTMKKLVEKRNKRARVDSGSEDEKDDPTGLFGSDSSDDEQEESKPSETDNDKDQADKP
AEDDTAPESREAEKNELFGSSSEDED
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgccgaggaagagccgagtaaccagcgcgcgctgctaatccccgtcaagaac
tcggagcaggccgtcgaagtgtttgtagatgagctaccggaggacgtgaacgatatcatt
gacatcttgcgcgccgaggtggcgccgctcgacgtgtggttacaattcgctgtggagtac
tataaccagggccatgtggcccagtttcaggagatcctggctgtagcctcagagccaggt
atcgaggagatctacaaggacaatgcgtcgcgcatgtgccgcatcaagttcttcatcgcg
ctagcaagccacgccgtgaacgccatgtggaatgaggaagatgagaaaaagcgcgaagca
atctcccaacgcgccgtgggcttcttccagcgcgctgatcgcttagatcatcaacatccc
atgacacttgtgggtaaagctcttatgtttatggccaagaacgaggacgatcgcgctgat
cgctttatcaaaagtgtgctcatctccaacaagaccaacctccccgcgatcctgggcaag
gcgctgctgctgtatcgaaagaaacaatacaaagatgccaagaagctctatctagaagcc
atcaagctgcacccgcgcagtcctcaggctgccaacatgcgcatgtgcttcgcctactgc
tgctaccacttgggagcagtagaaaaagcccgcgcggtcatgaaatacacagcatctttg
gatgaaaccaatgtggacgcagtgattgcgagtgcactgtggcaacttgccagccaaagt
cgagaggaacgcgccgtcagcatacgcgacgaaagctcgcgctttatgatcatgatccac
cacgcgcacgctattgacaagacgaaccccacggtgctgaaccatctggccaatcactat
ttctcccagtggatcccgttgccctgcaccgttagtgtggtgcgtggatctgctgttgtg
gccacctccaaggatatttcgagtgaggtctctcctggtcagattatctgcattggagac
aaatacgttgcctacattagccgtgatgaagatgccgtatcgtcgtctggactgaagctt
gatggaccgtatcgtgatgagtccgcgacagccacgaacattgcacggaaggactacgac
aagatgttcacacttgctggcaatgccttccacagcactaaaatcccagaaatccgctcg
gagagttgctatctcatgggtcgtggctgccacgcgcagggcaaatacaaggacgcttac
agctactacttcaatgctggtcgtctttggcccaagttcgtgttgccgtggtttggcctc
gcgcagatgtattacgagcgcaaggagtttacaaaggctgcatcgtatttggagaaggct
aacaaggcgtacccggagaacgtggagattttatcgctcctcggtgacgtctatggaaaa
ctgggcaaaaaagatgaggctgtagtattgcttcgacgcgttgtggagttagagccaggc
aacgtggaggctttgattggcacggctgagttgctgcatggatctccggaacggaaggac
cagattattgccatctcttcgtacattgcggcggagaaggtcatgaacaatgcttcggaa
cgagtgcctatggaagtttacgtcaacttaggagttcttcagcaacgtgtcggcaagact
agtgacgccattacatgctttaagaaggcactgacacagttgggcgatgatagcagtgct
aatgaggaaagcaagtcagaggaagctgatgctctggctgaagaagcctcaaccccaaag
cctacagaagcaaatatcaccattctgtacaatatgggtcgagtgtacgaggaaatgggt
aaccgtgatcgtgctaaaaagctttacgatgtgatcctggaggttttccctagatacacg
gactgtttgctgcgtttgggttgtatgctgcgcgatcgtggtcaggaggctgaggcgatc
aagacgttcgacaaggttctggaggtggacccgacgtgtgccgaagcctgcttgcttcag
ggcaatatttacctaaagaaacgcgagtgggtgtttgctcagaagaaatacgaaaaggtg
atgggaatgcctggtctcaagaatgatccgtacgcattcttgtctatgggcaacatcttc
atgagcaaccttggcgaaaagaatcgctacaccaagaacatgtcgctgagcgaagtgtac
tacaagaagactctggcgtcccatccacacaatatctacgctgctaatgggttgggtatt
atgatcgctgagaagggcaactttgagctggccaagcagattttctcccaagtgcgtgaa
gcgagtccggacatgcctgatgcgtggatcaatctcgcacacattttcgtcgctgaggag
cgttaccaggaggcgatccagctctacacggtgtgtctgaccaagtgctaccaaggacaa
gacctcgaagtactattgtatctggctaaggcttactacgagtcgaaggacttcccgagc
tgcattgccacgctctcccgtgccttgcacatgtacccgaacgacctgcgtctatggtac
aacacaggtcttgcccaggaagactatgctgtgatgacgctaggccaagaaactactgtc
acccggtcaggcagtggcagtgcagtgccccaacttcgtacaatggcagacgtacagcgt
gcgattctggatctgaagcgagcgcagcgtattttccgcttcctgctccaacagtccgag
gcaagtgccagctctagcaatagcgagaagaagaagcaccacaacagcttaccatttgac
aaggagaaggtgtccgatcacgaaaagttctgtggtgatacgctgacgaaggcgagttat
cacttggagttcgagcgacagaaggaggaaaaacgtcggttggagatcgaagctcaacgc
aagctgttgcgtgagtacgaggagcgtgtggctcgtgagcaggaggaggtacgtgtgaag
gaggaagacacgcgtagacgccacgaagatattcgactcaaacaggacgagcgactgaag
aagctgcacgaaggctggagtgtgcgtgagcgagaggaggaggagaagaaggtggtcaag
aaaaaaggaggcaagaagcgcaagaaagcagaagacgaagacggcggcttcattgatgac
ggagaggacgaggtggatgaggacggcgacaatagtatgtcgattgaggacatgaagaac
cggaactcgactatgaagaagctggtggagaagcgcaacaagcgcgcgcgtgtggattcc
ggctcggaagacgagaaggacgacccgacaggtctctttggctcggactcgagtgacgac
gagcaggaggaatccaagccaagtgaaacagataatgacaaagaccaagcagacaagcct
gctgaggatgatacagcaccggaaagccgcgaagcagagaagaacgagctctttggctct
tcctccgaggacgaggattag
DBGET
integrated database retrieval system
