Phytophthora infestans: PITG_03351
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Entry
PITG_03351 CDS
T01333
Name
(RefSeq) DNA mismatch repair protein Msh6, putative
KO
K08737
DNA mismatch repair protein MSH6
Organism
pif
Phytophthora infestans
Pathway
pif03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PITG_03351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pif03400
]
PITG_03351
DNA repair and recombination proteins [BR:
pif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PITG_03351
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
Motif
Other DBs
NCBI-GeneID:
9464508
NCBI-ProteinID:
XP_002906424
UniProt:
D0N012
LinkDB
All DBs
AA seq
1245 aa
AA seq
DB search
MKQKTQSSLLNFFSPPSSEGGSKKKAGTKSETKLGSTRKKIEFSPKLKRNPAAKEKEAAH
VEMEDVDKASGVGSKRKAYEDFLGTSSEEDEPIKTSKTTKEEKPKKRAGKIVIEDDDDSD
DEPAAPASRRKSKATTRNVVEEWEQDSPEERGDGEESEFSGAEEELSDDDIDDLVDEESE
EESKPPKKRRKSAPAATKTKKVASKSFLSPPPAAKKKWGNSTPTSSTKKSAPLADGPALP
SSVAGAGNHIHDSLPWLHEERRDINGNTPDSPDYDPRTLKIPPEFVKKETPAMVQWWEVK
SRNMDTVLFFKVGKFYELFHMDADIGFKELNLIYMKGDKAHSGFPEIAYSKMSSQLVAKG
YRVARVEQTETPDMLKVRNSSLAKKAKVVRREVCSLLSIGTNTVSFLDAPISSQDQVSKY
LLALKEAFDATQKSVRFGVCMVDCSTGAFQLSEFDDTEQRDRLKTMFAQFHVVEIVTERF
NISDDTKMVLKHAAPGAIRSSLRVGKEFWDASKTIDEIERAGYFKEHGWPGAVLYFLEMD
KVVKSEGQLAISALGGCIWHLRRCLIDHELLSLCNFKRYKPSDEEAREARANREAMSAAK
AELNQQYVVLDSQTIQNLEVLCNSFNGSRSGALIDIMDKTVTSFGRRMFQEWVLKPLCKI
GDIQERLDAVEELGTSGDLMMEIREFLRKLPDLERLLSRIHALGSAYRSKEHPDSRAIMY
ESQIYNVRKIKDFLAVLNGFDEAMNLTLELGPRLSQSNSPILQSLLKRYAIEDGVQPDVN
RGHFPDLTEKLEFFKRSFDQASAKKSGVIVPQAGIDPEFDAACAEIAEVEAELADYLSEQ
RSALRCRQISYWGKKKEDRYQLEVPESALSKQPKEYELKSRKKGYKRFHTPTIRALLKRL
ATAEEQKEEALKDQTRRIFHKFDEDYKYWMKAVQCLAVLDCLVSLGLLSSQSEGYTKPEV
VAASAANDGKPFIDIEEGVHPCVAATYGSGDFIPNDAQLGIQGKGQMVLLSGPNMGGKST
LLRQTCVLTLMAQIGSFVPAAKCRLSPVDRIFTRIGASDRILAGQSTLFVELAETATILN
HATSHSLVILDELGRGTSTFDGTAIAYSVVEHLLSDIQCRTMFATHYHSLVEEYVEDDRV
SLGHMGCIVDPENERKVTFLYKLEDGMCPKSYGINVAMLAKLPDEVIECAAKKSEQFERS
LQANSHTELENIRLAQKVREVLAEGEAGIDKLKQLWEQARNAIRA
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagaagacgcagagctctctgctgaatttcttcagtcctccgtcatcagaagga
ggctccaagaagaaagcaggtaccaaatcggagactaagctgggctccacccgcaaaaag
atcgagttctcgcccaagctcaagcgcaatcccgcggcgaaggagaaagaggccgcacat
gtggagatggaggacgtagacaaagcgtcaggcgtgggatcgaaacgcaaggcgtacgag
gatttcctaggcacgagctccgaggaggacgaacccataaagacgagtaaaacgacgaaa
gaggaaaagccgaagaaacgagccggtaaaattgtcattgaagacgacgacgactccgac
gacgagcctgcagcaccagcttctcgtcgtaagagcaaggcaaccactcgaaacgttgta
gaggaatgggagcaagattcgcccgaggagcgaggtgacggggaggagtcggagtttagt
ggcgccgaggaagaactttcagatgacgacattgatgatctggtggatgaagagtccgaa
gaagaatccaagccaccgaagaagcggcgaaagagtgctcctgcagcgaccaagacgaaa
aaagtagcatcaaaatcctttctgtctcctccaccagcagcgaagaagaagtggggaaac
tcgacgcctacgtcaagcaccaaaaagtctgcaccactagctgatggccccgccttgccc
agttctgtggctggagctggcaaccacattcatgattcgctgccgtggctgcacgaagaa
cggcgtgatattaatggcaacacaccagactctcctgactacgatccacgcactctgaag
attcctccggagtttgtgaagaaggaaactccagccatggtgcagtggtgggaagtcaag
tctcgaaacatggacactgtgctgtttttcaaggtgggcaagttttacgaattgttccac
atggacgctgacattggcttcaaggagctgaacctcatctacatgaagggagataaggca
cactcaggcttcccagagatcgcgtactcgaaaatgtcgtcccagctggttgccaagggc
tacagagtggctcgtgtggaacaaaccgaaactccagacatgctgaaggtcaggaacagt
tcgttagcgaagaaggccaaagtggttcgtcgtgaggtgtgctctctactgtccatcggt
acgaacactgtgagtttcctggatgctcctatctcgtctcaagaccaagtgtccaagtac
cttcttgcactgaaagaagcttttgacgctacgcagaagtctgtacgctttggtgtgtgt
atggtggactgctctactggtgcctttcagctctccgagtttgacgacacggagcagcga
gaccgtttaaagacgatgttcgcccaatttcacgtcgtggagatcgtgaccgagcgcttc
aacatctctgacgatacgaagatggtgctaaagcacgcagcacctggtgcgattcgctcg
tcactgcgagtgggtaaagagttctgggatgcctcgaaaaccatcgatgaaatcgaacgc
gcggggtatttcaaggagcatggatggccaggtgcagtactgtatttcctggaaatggat
aaagtcgtcaagtccgagggacaactcgcaatcagcgctctgggaggctgcatctggcac
ctgcgacgctgtctcatcgaccacgaattgctttctctctgcaattttaagaggtacaag
ccttcggacgaagaggctcgagaagcacgtgcaaaccgggaagctatgtctgctgctaag
gcggagctgaaccagcagtatgtcgtgttggattcccagacgatccagaacctagaagta
ttatgcaacagcttcaatggatcgcggtcgggcgctcttatcgatatcatggacaagact
gtgacaagctttggtcgccgcatgttccaggagtgggtgctcaagcctttatgcaagatt
ggcgatattcaagagcgtctcgacgccgttgaggaactgggtaccagtggtgatttgatg
atggagatccgcgagtttctccgtaaattaccggacttggagcgtctgctgtcgcgaatc
cacgcgctgggatctgcgtatcgctcgaaggaacacccggacagccgtgcaattatgtac
gagtcacagatatacaacgttcgcaagatcaaggactttttggctgtgctcaacggattt
gacgaggcaatgaaccttacgctcgagctgggtcctcgtttatcgcagtctaactcgccg
attttgcagtcgctcttgaagagatacgcgatcgaggatggagttcagccggacgttaat
cggggacatttccccgatcttacagagaagttggagttctttaagcgcagtttcgaccaa
gcttcggccaaaaagagcggtgtgatcgttcctcaagccggtatagaccccgaatttgat
gctgcttgtgctgaaatcgctgaggttgaagctgagctggcggattatttgagtgagcag
cgcagtgcactacgctgtcgacagatttcatactggggcaagaagaaggaggatcgctat
caattggaagttcccgagagcgcattgtcgaagcagccgaaagagtacgagctcaagtct
cgcaagaaaggatacaagcgctttcacacgccgacaattcgtgcgttattgaagcgattg
gctaccgcggaggagcagaaagaagaagcactcaaggatcagacacgccgcattttccac
aagtttgacgaagactacaagtattggatgaaggcggtgcaatgtctggcggtgttggac
tgcttagtcagtctcggcttactcagcagtcagagcgaagggtacacaaagcccgaagtg
gtggcagcaagcgctgcgaatgatggaaagccttttattgacatcgaagagggcgtacac
ccttgcgttgcagcaacatacggcagtggcgatttcatcccgaacgatgcacaactgggt
attcaaggcaagggccaaatggttctcctcagtggaccaaacatgggtggaaagtcgact
ttgctgcgtcaaacgtgcgtcttgacactcatggctcagatcggcagcttcgttcctgct
gcaaagtgccgtcttagccccgtggatcgcattttcactcgaattggcgcgtccgaccgc
atccttgcgggtcaaagtacgctcttcgtggagttggcagagacagcgacgatcctgaac
cacgcgactagccactcgcttgtcattttggacgaattgggacgaggaacgtcgacattc
gacggcacggccatcgcatattcagttgtggagcatttgctgagcgacatccagtgccga
accatgttcgcaactcattaccactcgctcgttgaagagtacgtggaagacgacagagta
tcgctgggtcacatgggatgtatcgtcgaccctgagaacgaacgcaaggtgaccttcctg
tacaagctggaggacggtatgtgtcccaagagctatggtatcaacgtggccatgttggcc
aaactgccggacgaagtgatcgaatgcgctgctaagaagtcggagcagtttgaacgctcc
ttgcaagccaattcgcacacggagctggagaacattcgactcgctcaaaaggtgcgagaa
gtgctagcagagggtgaggcggggatagacaaactcaagcaattatgggagcaagcacgt
aatgcaatccgagcttga
DBGET
integrated database retrieval system
