KEGG   Phytophthora infestans: PITG_03483
Entry
PITG_03483        CDS       T01333                                 
Name
(RefSeq) splicing factor U2af large subunit, putative
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
pif  Phytophthora infestans
Pathway
pif03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pif00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PITG_03483
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pif03041]
    PITG_03483
Spliceosome [BR:pif03041]
 Complex A
  U2 snRNP components
   U2 related factors
    PITG_03483
 Complex B
    PITG_03483
SSDB
Motif
Pfam: RRM_1 RRM_occluded Transformer RRM_7
Other DBs
NCBI-GeneID: 9467446
NCBI-ProteinID: XP_002906551
UniProt: D0MXQ4
LinkDB
AA seq 569 aa
MAGRGRELTLPAWMKKQQQETGPAHPLPPPRGAYPPPHHQLQPPRMPPSAPSQFANAPEA
SNGSSKSANPAEDLRRSSHRSRRSRSRSSHRRDRSRSKERRSSRHRSSRDRRSRSREREH
RRSRDQSERRSARRSRSRSRSSTRIVRRRKKSNFDVRPPGVTEKNAAAYAAQAILQQNMA
ALSGSVGASSFGPPQTSTPTGNAPPASLHTHSNPNPGYGFSSGLSQQTRHARRLYVGGIG
EISEPEITAFFNDVIDRALGEKQEGGSVVSVYINRERHFAFVELRSIELTTACMNLDGVS
YNGQPLKIRRPNDYNPATVPKDLGPIPQLNLAALGIVSTTVSDGPGKIFIGGLPYHLNEE
QVKELLQAFGPLRSFHLVKELSSNLSKGYGFCEYMDINVTDAACIGLNDMQLGDKTLTVR
RAMSQENAKAVASAAGTVNTGLEMGLDPSLAAMQAMSMAGIPSVPLGTPSRVIVLLNMVT
PEELEDEEEYADILDDIKGECERFGAVPSLLLPRPRDGVLSAVGKVFVEFADVQSAQAAA
TELHGRGFSNRTVAVEFMDEGKYARREIS
NT seq 1710 nt   +upstreamnt  +downstreamnt
atggccggccgcggacgagagctcacgctgcccgcgtggatgaaaaagcagcagcaggaa
acgggacctgcgcaccctcttcccccaccgcgtggtgcgtatcctcctccccaccaccag
ctacagcctccgcgaatgcccccgtccgcgccgtctcagttcgccaatgcaccggaggct
tcaaatggcagctccaagtccgcaaaccccgccgaagatctccgccgcagctctcaccgc
agtcgtcgcagtcgctcgcgctcgtcgcaccgccgtgatcgcagccgcagcaaagagaga
cgctcctcacgccatcgatcgtctcgtgatcgtcgcagccgcagtcgggagcgcgagcac
cgtcgctcccgcgaccagtcggagcgtcgttcagccagacgcagtcgcagccgttcgcgc
tcgtcgacgcgcatcgttcgtcgccgcaagaaatctaactttgacgtgcgcccacccgga
gtcacagagaagaacgcggcagcctacgctgcccaagccattctgcagcagaatatggct
gcactgtcgggctcggtcggcgcatcatctttcggtccgccgcagacgtctacgcctact
gggaatgccccgcccgcgtcattgcatacgcattcaaacccgaacccaggctacggcttc
tcctcgggtttgtcgcagcagacgcgtcacgctcgtcgactgtacgttggcggcatcggc
gagatctccgagccagagatcaccgcgttctttaacgatgtcattgaccgagcgctgggc
gagaagcaggaaggaggctccgtggtgtccgtgtacatcaaccgcgagcgtcactttgct
tttgttgaactgcgctccattgagctcacgacggcttgtatgaatctggatggtgtgtcg
tataatggacagccattaaagatccgccgtcctaacgattataacccggctacggtcccc
aaggacctgggaccgatccctcagcttaatttggctgctctgggcattgtgtccaccact
gtgagtgatggtccgggtaagatcttcatcggcggcctgccgtatcatctcaatgaggaa
caagtgaaggagctgctgcaagcgttcggtccgctgcgatcgttccaccttgtcaaggag
cttagctctaatctgtcgaagggctatggattctgcgagtacatggacatcaacgtgacg
gatgctgcgtgtattggactgaacgacatgcaacttggtgacaagacgcttactgttcgt
cgagcgatgtcgcaggagaacgccaaggctgtcgctagcgctgcaggtacagtgaacacg
ggcttggaaatgggactggacccgtctcttgctgcgatgcaggcgatgagtatggcaggg
atcccgagcgtgccgctcggtacgccttcccgtgtgattgtcctgctcaacatggtgaca
ccagaggagcttgaggatgaggaagagtatgctgacattttagacgacatcaagggcgag
tgtgagcgcttcggagccgttccgtcattgttgctaccgcgcccgcgtgacggggtcctc
agtgctgtcggtaaggtcttcgttgagtttgccgatgtgcaatcggcccaagctgcggcc
acggagcttcatggtcgaggcttctcgaacagaactgtggctgtcgaattcatggacgag
ggcaaatatgcgcgtcgggagatttcttag

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