Phytophthora infestans: PITG_03523
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Entry
PITG_03523 CDS
T01333
Name
(RefSeq) general transcription factor IIH subunit, putative
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
pif
Phytophthora infestans
Pathway
pif03022
Basal transcription factors
pif03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PITG_03523
09124 Replication and repair
03420 Nucleotide excision repair
PITG_03523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pif03021
]
PITG_03523
03400 DNA repair and recombination proteins [BR:
pif03400
]
PITG_03523
Transcription machinery [BR:
pif03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PITG_03523
DNA repair and recombination proteins [BR:
pif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PITG_03523
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
DUF2458
Motif
Other DBs
NCBI-GeneID:
9467485
NCBI-ProteinID:
XP_002906590
UniProt:
D0MXU3
LinkDB
All DBs
AA seq
548 aa
AA seq
DB search
MSESLVALVRVKKRDGRAEFSLKGLRWTADASPEAPTSHPPIAVPWSTVQDQQVSSLSSP
KAMIRLRLAHNSTLVLEFVAESGSLEEAFEVREQAKDFIARRLRENGASGTRSNAAALCN
PTEIKQRAALLAANPTLKRQHTEMVNDGLISEEDFWASRRHLIAGEASKRQKTGKTSAIL
TDLAADNDAGGNVVKYNLNAEVIHQIFIQYPAVYRAYQGQVPDKMTETEFWGAFFKSKYF
HRERKAGHEDMFTKYEEKEKQEAKGVSIDPRGIVDPLIDLTTTEEDAAVHHAKRHITEKE
NPSSITIAKFNRHGAYVLDPAHAGKLQQQKAGKGNAQQTLPQKKKAGYHDNLGDATLLDD
LQDKASPPYNPLTLEDESRYFQHAEKGTTDSSTTNKLPLSDAEKVFQATCKAPIKLENAY
PTSKTCFNVLAEVVACSDSTSDSASASSAANLASGALAAEYIPNEFKKQVYNQFHDVCEL
LRHFLSFKAKVAEGGGPEAQRKLDKIVEKMGSKYDELVKLRESLPPHEKNLLAPLLKPFD
DQLNLAFI
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagtctcttgtggcgctggtgcgcgtcaagaagcgcgacggacgcgccgaattc
tcgctcaaaggactacgctggaccgctgatgcatctcccgaggcccccactagccacccg
cccatcgccgtaccgtggagcactgttcaggaccagcaggtgtcatcgctctcaagtcct
aaggccatgatccgtctgcgcctcgcacacaactcgacactcgtgctggagtttgttgcc
gagtccggcagcctggaagaagctttcgaagtgcgcgagcaggccaaggattttatcgct
cgccggctgcgtgagaacggagctagcgggactcgctctaatgctgcagcactgtgcaac
cccacggagatcaagcagcgcgccgcgttgctggctgctaacccgacactcaaacgacag
cacacagagatggtgaatgatggtctcatctcggaggaggatttctgggcgagccgtcgc
cacttgatcgctggagaggccagtaaacgacaaaagacgggcaaaacgtcagccatcctg
acggacctggcagcggacaatgacgcgggcggtaatgtggtcaagtacaacttgaacgca
gaagtgattcaccagattttcattcagtatcccgccgtctacagggcttaccaggggcaa
gtacccgacaagatgacagagacggagttctggggagcattcttcaagtccaagtacttc
catcgagagaggaaggccggacacgaagatatgtttaccaagtatgaggagaaagagaaa
caagaggctaagggagtgagtatcgaccctcgcgggattgtggacccgttgattgatctt
acaacgacggaggaagatgcggcagtgcaccatgccaaacggcacatcacagagaaagaa
aacccgtccagtattaccatcgccaagttcaatcggcatggagcttatgttctagacccg
gcgcatgctgggaaactacagcagcaaaaagcagggaagggcaatgcacagcagacgctg
cctcagaaaaagaaagcaggttatcacgacaatttaggggatgctacgcttctggatgat
ctccaggataaagcttcaccaccgtacaacccactaacattggaagatgagtcgcgctac
ttccaacacgccgagaaaggaacgactgacagcagcacgacgaacaagctgccactatct
gacgctgaaaaagtgttccaggcgacgtgcaaggctccaatcaaactggaaaatgcctat
ccgacttctaagacgtgctttaatgtactggccgaagtagtagcgtgctcggattcgacg
agtgattcagcttcagcatcgtcggctgcgaatttggcgagtggcgcgttggctgctgag
tacattccgaacgaattcaagaagcaggtctacaaccaattccacgatgtgtgtgaatta
ctgcgacatttcctctcgtttaaagctaaggtggccgaaggtggcggcccagaagcgcag
cgaaaactcgacaagatcgtggagaagatggggtccaagtacgacgagctggtcaagctg
cgtgaatcgttgccacctcacgagaaaaacctgctggctccactgctcaaacctttcgat
gaccagctcaatctggcctttatttaa
DBGET
integrated database retrieval system
