KEGG   Phytophthora infestans: PITG_03795
Entry
PITG_03795        CDS       T01333                                 
Name
(RefSeq) hypothetical protein
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
pif  Phytophthora infestans
Pathway
pif03020  RNA polymerase
pif03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pif00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PITG_03795
  09124 Replication and repair
   03420 Nucleotide excision repair
    PITG_03795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pif03021]
    PITG_03795
   03400 DNA repair and recombination proteins [BR:pif03400]
    PITG_03795
Transcription machinery [BR:pif03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     PITG_03795
DNA repair and recombination proteins [BR:pif03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      PITG_03795
SSDB
Motif
Pfam: RNA_pol_Rpb4 KicB DUF3140
Other DBs
NCBI-GeneID: 9467734
NCBI-ProteinID: XP_002906839
UniProt: D0MYJ2
LinkDB
AA seq 155 aa
MSSNPQHVVDTEDAAELNLGDDFRNETCLSNAEVAVILEKQKSDYETQEKQLTNVFQKTY
SYVQRFSGTKDPVANQASVTELREALMSLAFQREADGETVEYRLEEFEIACLSNLNPEEV
EEAVALIPSLHKRFAEDEIEEILGIVSRTAARMFG
NT seq 468 nt   +upstreamnt  +downstreamnt
atgtcgtcaaacccgcagcacgtggtggacacggaggacgcggctgagctcaatctaggc
gacgacttccgcaacgagacatgtctgtctaacgccgaggtggctgttatccttgagaag
cagaagtccgactacgagacgcaggagaagcagcttaccaatgtgttccagaagacatac
tcgtatgtacagcgcttcagtggcactaaggaccctgtggccaaccaagcttcggttacc
gagctccgcgaagcacttatgtcgttagcgtttcagcgtgaagcagacggcgagacggtt
gagtaccgactcgaggagttcgagattgcttgtctgtccaatctgaaccccgaagaggtg
gaagaagctgtggctctcatccccagtctgcacaagcgttttgctgaagatgagatcgaa
gagatcctgggaatcgtgtctcgtacggctgctcgaatgttcggttaa

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