Phytophthora infestans: PITG_03879
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Entry
PITG_03879 CDS
T01333
Name
(RefSeq) hypothetical protein
KO
K24155
rabconnectin-3a
Organism
pif
Phytophthora infestans
Pathway
pif04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
PITG_03879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pif04131
]
PITG_03879
Membrane trafficking [BR:
pif04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
PITG_03879
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
PITG_03879
RAVE complex
PITG_03879
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WDR55
WD40_WDHD1_1st
Beta-prop_DCAF12
Beta-prop_IFT140_1st
WD40_Gbeta
Beta-prop_HPS5
Beta-prop_VPS8
EIF3I
Beta-prop_WDR36-Utp21_2nd
Frtz
Beta-prop_WDR41
Motif
Other DBs
NCBI-GeneID:
9467822
NCBI-ProteinID:
XP_002906918
UniProt:
D0MYS1
LinkDB
All DBs
AA seq
2410 aa
AA seq
DB search
MVFRVEESIAAVCAPSPNAQADLLVCQAVFESSRYLVYASDSQLSKFELWQVWNAQDAVR
CVRFNSSKKAARGALALCIDEGRGVLLMPASATSSRAAAMAEVSRASTLDDRTGPRLASL
ASGSDMIPRSDYVKAHLYLHLPRWAESVRWKCDDRLLNHLEWVESGDDLFLIGAGEKLSI
WKLVDDSVQVYLQRTVTLSGGGGPGVDLILSVEPVCHFDVAPSGRFAATAGKHDRIVKVW
DLGELSPHEGAPMSMFLAHTRALVSMTWSKDVNVYNARSTVAATTGACEMLFTLDRAGNI
SIWRKNVAPHRSFVLWKHFSAADFCVSSLDEDDSLESRIRVFGLVNHYWSRESSKTVSSI
NEALLSESTVTDALCLFHYGYGSLNEARRNELVSQRMDSITQMNTKLLGDRSGALADTSV
GEAIICGNVALEKSFVVNLLYGVLDNGDLCLYREEAAPFTGSSPKLSLLLSYNGLREHLV
DAHVYSVSSSDYQASGSAGFFVEVLFQQKKAESCLHYARLKLEVKSTSGRTRRGSISYSV
QNCEVCAVCRSMMSELAVKIAMTNMGGRLNVFLASGSLRRLDVAFRSRIADAVGPVTHTA
LFEERGALYLLIGGKLHAAMSSFSIAAHDELTLTACYMDESNDFEELDELISVGVPESVK
SEWSNSSSFFTQPSTSNPTKDYSMVVGAHKGGRRLTIWVFSFGISSVGSGASSVQLFRKT
TVDLPGTRLLSIASVPLVNLFAVTFASFDTDSQLTLWTFTDLDNLLEVKAAHRVDTGALM
RMASQAQRSHMEFHLTEEQFVFKHFSFSWCGRVAILFEGGKSEADDKICFLPALESSSEG
LVEVPRKQFGQVMSLEWTPPVTPERDCELLFLSSTTIGMLKFDCTLPRNKWSIAWSSSRL
SVRPENISSLSSYPYGLLRVGSSVAHLNLRDIDGAGSSSLYLPFASSVNPRGQPFSSQPP
SKAFPAYHPITLMYLLARGSFETLERILEYVKVKIVEHEETCYLRMSDDSVLRSLPLLSL
SKLLGDPTSTGSTTDERSDVYLRGKGYKATSDLFAMDFGASRRYGATAGGADRADMLFAP
QTSALADSSAGQTTETSTSKLETDDFSKFFSEHKGSLTFMTPQESEGFLTIVAGIKKTIS
WERDSSRQKDEAALRFHASLLWPARAGLCSAQVAWGALSDFQPELLQECFPTGTMSWKEM
KHLRLPFWLKSSAKLVQFTEKVAQAEYAANRDPFAVAVFYVLLGKTTLLASLFKMASESR
ISELLRNNFADLRWKNAAIKNAYVLKTKQRYELSAAFFLLGGKVTEAVSVAEQADETLVL
SFLIARIAERWDLGGQDNSSSSSGAADFSQASFMGLKSKNVCIDFLSTTVWTKASECGDV
YMCFLVKYSLGETSTAIDILMTPPITYWSAFGKSLLGACDLLRFLRKTIVPMKLALKEKI
IRLNTSAVLRMQDAGLGIPALIHQRDVASFVQDFRRERATSSAATAFLACRQRILVAAIG
NQVDFLYATFLKSMREAMTTPASLAPSTRFDLEERLNEEIQCIVRHGGDYALPGVPETSK
ESLEHRVQTAVVDSLVHSGRLAALDFLVSGWSRSEGSSPKFAFTSPLPRFIEVITEGVAT
VASGDLISAAADSLHTRKVDQTCSNLLAMATRLLLWLQYYYLKPAKQRATLPNREFVRVA
VAAVHSVICICCRYLKNACCLYRVLRLIFPHKDGLSSSSEGMLNDIAGGNLCVTCTSLRR
PSTTPTSTLGASSLQQDIPVLYQAVCMLQTELDEFTAAVKTNRLHHPIPTRDFEPPLFSY
CSYWGLVLMMAADAMPAHISRIAGQDVIATAELSKKLVEAWKSYSNRLAAFALKHLLCDL
ASFFFSPFSFSHGTSSPASQSSPRGPASPSRSGAASSPRAFLVDGPGSPPSPQRVNRRQL
LKCECESCPWLLLVELFTDKNELLLRLNAQLECCSEKIDEAVRWGRLPEPASRKSALTRS
QKLLLSTVAESASTFSRATNLTDQLKRRMASMPTAAAVHVQCVYRSETNIKAMCFNRAAG
EDAEVSVCSSKGIFRASCMDYADGSRFQFKGMYASPQTSFFSTDVLATRNIGPPSPLRNP
AHLLSSPLDPKMASFKPTAVASHPFLPLFVSGNHKGRVHLWSYDRLSAICAFQTKDIPFP
SSPSMLSGWRSVKALEFDNLGQQLGAVDAMGHLFMWKFSELDRAPYYREIVCHDKGAKGL
VFLNSSSTLATVGTSSEKRNVCVWDTLLPTSKALVSTPACHPAGATSVAFSSTHQLLITG
GAGGALSIFDMRQRRVLHTISNAHETPIKTIVMHPSGDCVLSGSASGDVKIWSLPIFREV
AFLSKVHLKPSFLGDAATNFLSDAASNVAINVTNSSWGVTDAVATKDAFYTSGTDGSIQR
LKVPSLGTRL
NT seq
7233 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttcgtgttgaggagtcaattgccgctgtgtgtgcgccctctcctaacgcacag
gcagatctgctcgtctgccaggccgtgttcgagtcaagccgatacctcgtctacgcctcc
gactcgcagttgtccaaattcgaactgtggcaggtctggaacgcacaagacgctgtccga
tgcgtgcgcttcaactctagcaaaaaagcagcacgtggtgcgctggcattgtgtatcgat
gagggccgtggtgttctactaatgcccgctagcgccacatctagcagggcagcggctatg
gcggaggtctccagagcttcgacactggatgaccgcacaggaccaaggttggcctcttta
gcttcaggtagtgatatgatcccgagatccgactacgtgaaggctcatttatatcttcat
ctgcctcgatgggccgaatctgtgcgctggaaatgtgacgaccgcctattaaaccacttg
gaatgggtggaaagtggagacgacctttttttaattggagctggagaaaagttgtccatt
tggaagctcgtggatgactcggtacaggtttatttgcaacgcacagtcacattatcagga
ggtggaggacctggcgtggacctgatcctatcagttgaaccggtttgtcactttgatgtg
gctccaagtgggagattcgccgctacggccggtaaacatgacagaatcgtgaaggtgtgg
gatctgggggagctatcgccgcacgagggcgctccgatgtcgatgtttcttgcacatacc
cgagctctagtgtcaatgacgtggtcgaaggacgtaaatgtttacaacgcgcgatcaact
gtagctgcgacgacaggagcttgtgagatgttgttcacacttgatcgagcaggtaacatt
tctatttggaggaaaaatgttgctccacaccgttcctttgtgttgtggaagcacttttct
gctgcggatttctgcgtgtcgtcgcttgatgaggatgacagtttagagagtcgtatccga
gtattcggcttggtgaatcactattggtcgcgagaatcatccaagaccgtgtcgtcgata
aatgaagcgttattgagcgaaagcacagtgacggacgcactatgtctattccactacggc
tatgggtcgctaaacgaagcacgtcggaatgaattggttagtcagcgcatggatagtatt
actcaaatgaatactaagctattaggcgatcggagcggtgcgctggcagatacttctgtg
ggagaagctattatttgtggaaacgtagcgttggagaaatcgtttgtggtgaatttactc
tacggggtgcttgataatggcgacttgtgcctctatcgtgaagaggcagctcccttcacg
ggttcatctcctaagttgtcgcttcttctcagttataatggacttcgcgaacatcttgtt
gacgcacatgtgtacagtgtcagctcgtctgattaccaagccagtggctcagcaggattc
tttgtggaggtattgtttcagcagaagaaagctgaaagctgtctgcattatgcgagacta
aagcttgaagtcaaaagcacttctgggagaacccgcaggggctctatctcctattcagtt
cagaactgtgaagtctgcgctgtatgccgtagcatgatgagcgagttggccgtgaagatt
gctatgacaaacatgggcggacgacttaacgtctttctggcaagcgggtcgttgcggagg
ctcgacgtcgcttttcgctcgagaatcgccgacgctgttggccccgtcacacacacagct
ttgttcgaagagcggggagcactgtatctgcttatcggtgggaagctgcacgctgcaatg
tcctcgttttcgattgcggcgcatgatgagctgacacttacagcatgctatatggatgaa
agtaacgatttcgaagagctggatgagttgatttccgtgggagttcccgaatctgttaag
agcgagtggtcaaacagttcgtcattcttcacgcaaccatcgacgagcaaccccacgaag
gattacagtatggttgttggtgctcataaaggaggaagaagactcactatttgggttttc
tcgttcggcatatcaagtgttgggtcgggagcttcctctgtccagctatttcgaaaaacg
acagtcgacttacctggaaccaggttactgagtatcgctagcgtcccgctggtgaacttg
tttgcagtcacatttgctagctttgacacggactcgcagctgaccttatggacatttacc
gacctcgacaacttacttgaagtgaaagctgctcaccgagtcgacactggcgcattaatg
agaatggccagccaggcacaaaggtcgcacatggagtttcatctcactgaagaacagttc
gtattcaagcatttcagcttcagctggtgcggacgagtggctattttgtttgaaggaggt
aaaagtgaagctgacgataagatttgcttcttgcctgctctggagagctcctcggaagga
cttgtagaggtcccacgcaagcaatttggccaagtaatgtcgctggagtggactccaccg
gtaacgccagagcgggactgcgagcttcttttcttatcgtctacaaccattggcatgctg
aagttcgattgcacactgccaagaaacaagtggagtatcgcctggtcgtccagtcgctta
agtgtgcgacccgaaaacatctcgtcactgtcaagttatccctacggactcctccgtgtc
ggatccagtgtagctcatctcaacctacgagatattgatggagctggatcgtcatcactg
tacctcccatttgcatcgtcagtgaaccctcgtggacagcccttcagctctcagccacct
tcaaaagcatttccggcgtaccatccaatcacgctgatgtacctgcttgctcgtgggtca
tttgagacacttgagagaattcttgagtatgtgaaggtaaaaattgtggagcacgaagaa
acatgctatctacgaatgtcggacgactcggtgctgcgaagtctgcctttgctctcattg
tcaaagttgcttggagaccctacgtccactggaagcacgactgacgagcgatcggatgtc
tacctgagaggaaagggatacaaggcgactagcgatctatttgcgatggactttggggcg
tctcgtcgatatggagctactgcaggtggtgcggatcgtgcagacatgctgtttgctcct
caaacttcagctttggccgattcatccgccggtcaaaccaccgaaacatcgacgtcgaag
ctggaaacggacgatttctccaagttctttagtgaacacaaaggttctttgacgtttatg
acgcctcaggaatcggagggttttctcacgatcgttgctggtatcaagaagaccataagc
tgggagcgtgacagcagtcgtcagaaagacgaagctgctcttcgttttcatgcgtctttg
ttatggccagccagggctggactatgctcggcacaagtcgcttggggagcgctcagtgac
ttccagccagagctacttcaggaatgcttcccgactggaacaatgagctggaaggagatg
aagcatttgcgattgcctttctggctaaaaagctcagctaagcttgtgcaattcacagag
aaggtggcacaggctgagtatgcagctaaccgagacccgtttgcggttgctgtcttctat
gtactcttaggcaaaaccactctgttagcgagtctgtttaaaatggctagcgagtctcga
atttctgagcttctgaggaacaactttgcagacttgcgctggaagaatgctgccatcaaa
aacgcctatgtgttgaagacgaagcagcgctacgagctgtcggcggcgttctttttactt
ggcggcaaagttacggaagcagtctcggtggctgagcaggctgatgagacccttgttttg
tcgtttttaatcgctcggattgcggaaagatgggacctcggaggccaggataactcatcg
agcagctctggtgcggcagatttctcacaagcatcttttatgggtcttaaatctaagaat
gtgtgtatcgacttccttagcaccaccgtctggacaaaggcttctgaatgtggagatgtg
tacatgtgcttcctagtgaagtattccctgggggagaccagcaccgccatcgatatcttg
atgacaccaccgattacgtactggtcagcattcgggaaaagtcttcttggcgcctgcgat
ctactgcgctttcttcgaaagactattgtgccgatgaagctcgcgttgaaggagaaaatt
ataaggctgaacacttccgccgtgcttcgtatgcaagatgcgggtcttggaattccagcg
ctcattcaccagcgtgacgtcgcttccttcgtgcaagatttccgtcgagaacgcgctaca
agctccgctgcaacggcatttttagcttgtcgtcagcgcatcttggtggcagccatcgga
aatcaagtggacttcctgtatgccacgttcttgaagtcaatgcgcgaagcaatgacaact
cctgccagcttagcgcccagtacacgatttgatctcgaagagcgactgaacgaagagatt
caatgcattgtacgccatggaggtgattatgctttaccaggggtaccagaaacgagcaaa
gagagcttggaacacagggttcagaccgctgtagtggactcgctggttcactctggtcgt
cttgctgcattggatttcttggtctctgggtggagtcgttctgagggttcatcaccaaaa
tttgcctttactagtccgctgcctcgttttattgaagtcatcacggagggagtcgctacg
gtagcgtcgggagatctcatctctgctgccgcggactctttacacacccggaaagtggat
caaacgtgctcaaacttgttagctatggcgacgcgtctgctgctttggctgcagtattat
tatctgaagccagcgaagcaaagagcgacgctaccgaaccgcgaatttgtacgcgtagca
gttgcagcggtccacagcgtcatctgcatctgctgtcgctatctgaagaacgcgtgttgt
ctgtaccgtgtgcttcgtctcatcttcccacacaaggacggattgtcttccagctctgag
gggatgctgaatgatattgccggcgggaatttatgtgtaacttgcacttctcttcgccgc
ccaagcacgacccccacttccactctaggagcgtcatcgctccagcaagacattccagtg
ctgtaccaggccgtgtgtatgctacagacggagctggatgagtttacggctgcagtgaag
acgaacagactccatcacccgataccaacacgcgattttgagcccccactcttctcgtat
tgttcgtactggggcttggttctcatgatggccgccgacgccatgccagctcacatctct
agaattgcggggcaagacgtcatcgccaccgcagagctgtccaagaaactagttgaagct
tggaaaagctatagcaaccgactcgctgcatttgccttgaagcatctgctgtgcgacttg
gctagctttttcttcagtccgttctcgttttcgcacgggacgtcaagcccagcttcccaa
agttcgcctcgagggccagcctctccaagtcgtagtggtgctgcgagtagccctcgcgca
ttcctcgtcgacggtccgggatctcctccatcgccacaacgagtgaacagaagacaattg
ctgaaatgtgaatgcgagagttgtccatggcttctcctcgtggagcttttcaccgacaag
aacgagcttctgcttcgcttgaatgcacaactagagtgttgtagtgagaaaattgacgag
gcagttcggtggggacgactgccagagcctgcttcacggaaatccgccttaacccgctcg
cagaagctgcttctatcgactgtcgctgaaagtgcgtcgacgttttcgcgcgccactaac
ctgacagaccagcttaagcgacgaatggcgtccatgcccacggcagcggctgtgcacgtg
cagtgcgtgtatcgcagcgagaccaacatcaaagcgatgtgctttaaccgtgccgctggt
gaagacgcggaagtgagtgtgtgcagcagtaaaggcatcttccgtgctagctgtatggac
tacgccgacggcagtcgattccagttcaagggcatgtacgcgtcaccacaaacgtcattt
ttctctactgacgttctggccactcgtaacattggacctccatcacctctacgaaaccca
gcgcatctactatcctccccgttggaccccaagatggcgagttttaagcctactgcagta
gcttctcatccgttcttgccactgtttgtgtcggggaatcacaaaggccgtgtgcatttg
tggtcctacgaccgtctcagcgcaatttgcgcgtttcaaaccaaggatattccgtttcca
tccagtccgtcgatgttatccggttggcgaagtgtgaaggcgctagaattcgacaatctc
ggccagcagcttggcgcagtggatgccatggggcatttgttcatgtggaagttttctgag
ctagatcgagctccatattaccgcgagatcgtgtgtcatgataagggcgccaagggactg
gtattcctcaactcaagcagcaccctcgccaccgttggaacttcatccgagaagagaaat
gtgtgcgtgtgggatactctgctgccgacttccaaggctcttgtatcgaccccagcctgt
cacccagcaggcgccacctcagtcgcgttttcgtcgacgcaccaattgctcattacggga
ggtgcagggggcgcgttgagcattttcgacatgagacagcgtcgagttttgcacacgatc
tcaaacgcacatgagactccgattaagacgatcgtaatgcatccaagcggagactgtgtg
ctgtccgggtcagccagtggtgacgtcaagatctggtccttgccgatattccgggaggtc
gcttttttaagcaaggtacacctcaagccttcgttcctgggcgacgcggccacgaacttc
cttagcgatgcggcgtccaatgtggcaattaacgtgacaaattcttcgtggggagtgacc
gatgctgtcgccacgaaagacgcattttatacgagcggcacggatgggtccatccagcgt
ctcaaagtgccttcattggggacgcgtctctaa
DBGET
integrated database retrieval system
