KEGG   Phytophthora infestans: PITG_03987
Entry
PITG_03987        CDS       T01333                                 
Name
(RefSeq) DEAD/DEAH box RNA helicase, putative
  KO
K12811  ATP-dependent RNA helicase DDX46/PRP5 [EC:5.6.2.7]
Organism
pif  Phytophthora infestans
Pathway
pif03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pif00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PITG_03987
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pif03041]
    PITG_03987
Enzymes [BR:pif01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     PITG_03987
Spliceosome [BR:pif03041]
 Complex A
  U2 snRNP components
   U2 related factors
    PITG_03987
 Complex B
    PITG_03987
SSDB
Motif
Pfam: DEAD Helicase_C FYVE KH_12 FIST FIST_C KH-I_KHDC4-BBP
Other DBs
NCBI-GeneID: 9467919
NCBI-ProteinID: XP_002907014
UniProt: D0MZ17
LinkDB
AA seq 2091 aa
MNQGAGPPAAATNNATAAPDPANEVAAAAANAADWSDSADNSNSQEDESIPPPQGPSLSY
ERKIRLHKYAENRARSCLGLLSDTSSALWKVHDCKNDIGVYKPSSDWSESVSAKAVVFAN
AAFPNVLKTIYDLKTSDKFKLFMRKVLGDMFLDAEVLEDLNGTGVYPSANPPRDAREMYK
QAAIKWWAIKSGSLASKSSDFYVLEYIGIETSGGDIVACYLFQESLAEVGGMPHIQGNNL
ERSQFDALICKFERTSSPDYKDDFVTISIAFQRPPPMVSLFRSNPAVEMVTQLARGLRDL
LEDPPELQEISVVKTSAWVKDKERRFCVLCNKRFSPIFRRRHHCRTCGEVICWACSSTIR
VPSISFTHNDTGKQVLSRHQPSIRVCSKCVVSHHRSKSGRELSNQEDFKDWIQRSTEQQQ
LAVGAETGHYAAPSPAPVPSQLHKHLLRSDWKTLDDSNSAVVHSATATAEQACNVASKHY
AVVYVDRHSEVSIERATGHGRDNPLSIAKAAPKKNPDRSRSSSAGRRAPVANPVKQTAPP
THDNQEETERRSNSMERLPVQNNTSYVHAASAWATNKTEALAMTGAFQELMTKLGGDVHF
VVVGFSTGFNAEVIVNLLRQLAPGVPYIGGTIARGMCDENAWVSVNRHNDEGLVTLWGVN
DPHGIYSVVHAEYSQSDAHEKTYAAAKTAFARVAGDVDAGEKPAFIAAYACPLFVEHAID
GIREAIHCPIIGGCSSDATRHGEGEVSVSWIQISSSSSSDYTKSVRDGRGDWTEMGIAFA
LCFPSVETYVSWFSGYSPVGVNSEYCMGTVTKASNKTIYEIDCKPAAEVYQEWLDVASDK
SQTELSSIGFPRLGSLHPLGTTIDFVSNQMEIDRSIDANSSSSLCSMQSSDWSKLINMTA
VITGINEDGSLSTTSSVASGTNVVLMETSAQSLKTAINKMGAQAVESNKFYIHETIGCLM
FLSAGVQALLGHKSMAEMMAQDAASPRRHRRRRSKSRSSRRHSSSSRRKRSRSRSLSSHS
ASSGASRSSSRSRERRRSSKSGDRHRRKRSKTERRERRRSPSRSRSRSRSESRRSSSKKK
RDRSHRGGRKSSSRRSRSRSETRAEASRRKRSESKEEIKNDEKRKANGHVEHAKPQEKSS
GSSSEKKRVATDPPVVTAPVAGATLKKFKFGGISLKPGNAKNVVKKKPAVLFSALSEDTN
PPPNGEKDPSKKHKLLLEEQKEEEKAKFLAEEDAVPKQLDLHTEEDEEKGETAEERKKRE
QEEARQRERVQKVVEEVDPLDAYMAGLVDESARANPAANVISQSEIEAKGKINIYGTFLP
PEAADQAGAVVSTPSAATQTTTNVDKETPEEREAREERELKEFMRAIKEKREQETKASSN
TTAASNGADPEDPLVKKKDTGRIYQGFEEDIIGEDSELMDQRSALEILQDQQKKKEIKPV
DHSKMNYISFQKKFYVVPKEIKDLSDEEVEAQRKVAEMKVRGKNCPRPLQKWTQCGFSVR
MLQLIKKHGYEEPFAIQKQALPAIMSGRDVIGIAKTGSGKTLAFLLPMFRHVLAQPPLQE
NEGPIGIIMAPARELAQQIYVEARKFSKGLGLRATAVYGGSSVSEQIANLKRGSDIVICT
PGRMIDILCMSAGKMVSLQRVTYVVLDEADRMFDMGFEPQITKIMMNIRPDRQTLLFSAT
FPRSVESLARKVLKKPVEITVGTRSTASGDITQYVEVREEDDKFMRLLQLLGLWYEKGNI
LVFVNKQQACDQIFQDLMKAGYPALSLHGGKDQVDRDYTIDDFKRKVRTVMVATSVAGRG
LDVKDLVLVINYHCPNHMEDYVHRVGRTGRAGRKGTAYTFISPDEEEYSVDLVKALENAK
QTIPPELTALAEGFTAKVKRGEARYHGSGFKGKGFTFDETERNETQRTADLQRRQYELDQ
GILVEDSGAVDDDDMEEPSKENIASTSTTEKQFAPAGQKTMPIDSGAMSAFIKAQKIIQN
LDLKYRGTGSGENHFVEELEINDYPQQARWRVTQKEASDSVAELTGAAVIARGSYIPAGR
KPNPSERKLHLAIEGPTQASVIDARRELQRILDETTMQVGLGGDKYGKYSL
NT seq 6276 nt   +upstreamnt  +downstreamnt
atgaaccaaggcgctgggccgccagcagcggcaacaaataatgcgactgcagcccccgac
cccgcaaatgaggtggccgctgcggcagccaacgcggcggactggagcgactcggccgac
aactcgaactcgcaggaagacgaaagtattccgccgccacagggaccgtcactctcgtac
gagcgcaagatccgtctgcataaatacgctgaaaaccgtgctcgctcgtgcctcggcttg
ctgtccgacacgagcagcgcgctctggaaggtgcacgactgcaagaacgacatcggcgtg
tacaagcccagctcggattggtccgagtcagtctcagccaaggctgttgtgttcgcaaac
gcggccttcccgaatgtactaaagacgatctacgatctgaaaacatccgacaagttcaag
ctcttcatgcgcaaagtgttgggcgacatgttcctagatgcagaagtgctcgaagatctc
aatggcactggagtctatccgagtgccaacccacctcgagacgctcgtgaaatgtacaag
caggccgccattaagtggtgggccatcaagtcaggctccctggcaagtaagtcttccgac
ttttacgtgttggagtatattggcatcgagacatccggtggagatatcgtggcatgctat
ctcttccaggaatcgctggcggaggtgggcgggatgcctcacatccaggggaacaatctg
gagcgctcgcaatttgatgctcttatctgcaagttcgagcgcacgtcgtcgccagattac
aaggatgattttgtcacgatttctatcgctttccagcggcctccacctatggtcagcttg
ttccgcagcaatcctgctgtcgaaatggtcacgcagcttgcgcgcggactacgtgacttg
ctcgaggatcctcctgagcttcaagaaatatcggtcgtcaagacttctgcttgggtgaaa
gacaaagaacgccgcttctgcgtgctgtgtaacaagcgcttttcgccgatcttccgtcgt
cgtcatcactgccggacttgcggcgaagtgatctgctgggcgtgtagtagtactatccgc
gtgccttcgattagcttcacgcacaatgatacaggtaagcaggttctatcgcgtcaccaa
ccgagtatccgtgtgtgcagtaaatgtgtggtgtcccatcatcggtcaaagagcggcagg
gagctgagtaaccaggaggatttcaaggattggattcaacgcagcactgagcagcagcaa
cttgctgtcggtgctgagacaggacactacgcagcaccttcgcctgcaccagtgccttcg
cagcttcacaagcacctactcaggagcgactggaaaaccctcgatgatagcaacagtgca
gttgtccacagcgccacagctacggctgagcaggcatgcaacgtggcgtccaagcactat
gcagtcgtgtacgtcgatcgacactcggaagtcagtattgaacgcgcaaccggtcatggt
cgagataacccactgagcatcgccaaggcagctcccaagaaaaaccctgatagaagtcgc
tcgtccagtgctggtcgtcgtgctccagtagcaaaccctgtgaagcaaacggccccacca
actcatgataaccaggaagaaacagagcggcgttccaactcgatggagagactcccggtg
cagaacaatactagttacgtccatgcagcttcggcgtgggcaacaaacaagacagaagct
ctcgctatgactggagcctttcaagaactgatgacaaagctcggaggtgatgtccatttt
gtagttgttggcttctcaactggcttcaacgccgaagtgattgtgaaccttttgcgccag
ctagctccaggagttccctatattggcggcacgatcgctcgtgggatgtgtgacgaaaat
gcttgggtgtctgtgaacagacataacgatgaaggcctcgttactttgtggggagtaaat
gatccgcatgggatttactccgtagtccacgcagagtattcgcagagtgatgcccatgag
aagacatacgctgcagctaagactgcctttgcccgcgtggcaggtgatgttgatgccggt
gaaaaaccagcgttcattgctgcgtacgcttgtcctctgtttgtagagcatgctattgac
ggtatccgcgaggcgattcactgtccaattattggaggctgctcttcagacgctacgaga
catggtgagggtgaagtatcagtgtcctggatccagatcagcagtagcagcagttctgat
tacacgaaaagtgtccgggacggacgaggtgactggactgaaatgggcatcgcgtttgcg
ctctgcttccccagcgtggagacgtatgtgagctggtttagtggctacagtccggttgga
gttaatagcgagtactgcatgggcacggtgacgaaggcgtcaaacaagaccatctacgaa
attgactgcaaacctgcggccgaagtctaccaagagtggctcgacgtggcatcagacaag
agtcaaactgagctctcgtcgatcgggtttcctcgactcggtagtctgcaccctttaggt
accaccatcgacttcgtctcaaatcaaatggagatagaccgtagcatcgacgcgaactct
tcttcttcgctgtgctccatgcaatcaagcgactggtccaaactcatcaacatgaccgcg
gtgattactggaatcaatgaggacggatcgcttagtacgacgagttcagttgcgtccggt
accaacgttgtgctcatggagacatctgcgcagtcattgaaaactgcaatcaacaagatg
ggagcgcaagccgtggaaagcaacaagttctacattcacgagacgatcggttgtctgatg
ttcttgtcggccggagtccaagctctgctgggccacaagagcatggctgagatgatggcg
caagacgccgcgagtccccgtcgccatcggcggcggcgcagtaaaagtcgctcatcgcgt
cgccactcgtcatcatctcgtcgcaaacgctcgcgctcgcgctcgctgtcgtcgcatagt
gcgtcgagcggcgcgtctcgctccagttcgcgatctcgggagcgacgccgctcgtccaaa
tctggcgacagacaccgccgcaaacgctccaagacggagcggagggaacgacgtcgttcg
ccttcacgctcgcgctctagaagtcgctcagagagcagacgtagtagctccaagaagaag
agagacagaagccacaggggcggacgcaagagtagcagcagacgcagtagaagcaggagc
gagacgagagctgaagcttcgagacgaaagcgatcggagtctaaggaggagattaagaac
gatgagaagcgtaaggccaatggccacgttgagcacgcgaaaccacaagagaagagtagt
ggctctagctctgagaagaagagagtagctacagatccccctgtcgtcactgcaccagta
gctggtgcgacgttgaagaaatttaagtttggcggcatttcgctaaagcctggcaacgcg
aagaacgtggtgaagaagaagcctgcagttttatttagcgcactgagtgaagataccaac
ccgccacctaatggcgagaaagatcctagtaagaaacataaacttcttcttgaagagcag
aaagaagaagagaaagccaagttccttgcagaagaagatgctgtgcccaagcaactggat
ttacacacagaagaagatgaagagaagggtgaaacagcagaagaacgtaaaaagcgagag
caagaggaagccaggcaacgcgaacgggtgcagaaagtggtggaggaagtggatcctctg
gacgcctatatggctggactggtggacgaatcagcgcgtgctaaccctgcagctaacgtg
atctcgcagtcggaaatcgaagccaagggcaaaatcaatatttatggcacattcttgccg
cctgaagctgcagatcaggcgggtgcagtcgtgtcgacaccctctgctgctactcaaacg
acgactaatgttgacaaggagacgccagaagaacgtgaagcccgtgaagagcgtgaactg
aaggagtttatgcgtgcaattaaagagaaacgcgaacaagagaccaaggcttctagtaat
acaacagctgcaagcaatggagcagatcctgaagatccgttggtaaagaaaaaagatacg
gggcgtatctaccaagggtttgaagaagacattatcggcgaagactccgagctgatggat
cagcgttcagctctcgagattcttcaggatcagcagaagaagaaggagatcaagcctgtg
gatcactccaagatgaactatatttcgttccaaaagaagttttacgtggtgcctaaggaa
atcaaggatctgtcggatgaagaggtggaagcacaacggaaggtggctgagatgaaggtt
cgaggaaagaattgcccgcgtccgttgcagaaatggacccaatgtggcttcagcgtccgc
atgctccagctgatcaaaaaacacggctacgaggagccgtttgctatccagaagcaagcg
ctacctgctattatgtctggacgtgatgtcattggcattgcgaaaacaggttcaggcaag
acgttggcgttcctgctccccatgttccgtcacgttcttgctcaacctcccctccaagaa
aacgaaggccccattggaatcatcatggcacctgcgcgagaacttgctcagcagatttac
gtggaggctcgtaagttctcgaagggtcttggactgcgcgctactgctgtgtacggagga
tcgtcagtctcggagcaaattgcgaacctgaaacgcggctcagatatcgttatctgcacg
ccagggcgaatgatcgatatcctgtgcatgagtgctggaaagatggtgtcactgcagcgt
gtgacgtatgtggtgctagatgaagctgatcgtatgttcgacatgggcttcgaaccgcag
atcacgaagattatgatgaacattcgcccagaccgacagacgctgctcttctcagcaact
ttccctcgctctgtggaatccttggcccggaaagtactgaagaagccggtggagatcact
gtgggtacacgtagtacggcatcaggcgatattacgcagtatgtagaagtccgcgaagaa
gatgacaagtttatgcggctcctgcaacttctgggtctttggtacgagaagggaaatatc
ctagtgttcgtgaacaaacagcaagcttgcgaccagatattccaagacttgatgaaggct
ggatatcctgcgctctcgctgcacggtggcaaagatcaggtggatcgggactatacaatc
gatgacttcaaacgcaaggtgcgaaccgtgatggtggcgacttctgtcgccggtcgaggt
cttgacgtgaaggatttggttcttgttatcaattaccactgtcccaaccatatggaagac
tacgtccaccgcgttggacgaaccggacgagctggtcgaaagggtacagcctacacgttc
atctctccagatgaggaggagtactcggtggatcttgtcaaagcattggagaacgcaaag
caaactattcctcctgaactgaccgcacttgcagaaggcttcacggcaaaggtcaagcgc
ggtgaggcgaggtatcacggcagtgggtttaaaggcaaaggctttacattcgacgagaca
gaaaggaacgagacccagcgcacagcagacctgcagaggcgtcaatatgaattggaccag
ggcattttggttgaggattctggtgcagtcgatgacgatgatatggaagagccaagcaag
gagaatattgctagcactagcacgactgaaaagcagtttgcgcccgctggtcagaagacg
atgcctatcgacagtggagcgatgtctgctttcatcaaggcacagaaaatcatccagaat
ctggatttaaagtacaggggaaccggttctggagagaaccactttgtcgaagagctcgaa
atcaacgactatcctcaacaggctcgatggcgagttacccagaaggaggcaagcgactcg
gtcgcagaactcactggtgctgctgttatcgcgagagggtcgtatattcctgctggccgg
aagcccaatccatcggaacgcaagcttcacttggctatcgagggcccgactcaagcttcg
gttatcgacgccaggcgagaactgcaacgcatcttggacgaaaccacgatgcaggtcggt
ctgggcggcgacaaatacggaaagtacagtctgtag

DBGET integrated database retrieval system