Phytophthora infestans: PITG_04426
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Entry
PITG_04426 CDS
T01333
Name
(RefSeq) DNA polymerase alpha-associated DNA helicase A, putative
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
pif
Phytophthora infestans
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pif03009
]
PITG_04426
03012 Translation factors [BR:
pif03012
]
PITG_04426
Enzymes [BR:
pif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PITG_04426
5.6.2.5 RNA 5'-3' helicase
PITG_04426
Ribosome biogenesis [BR:
pif03009
]
Eukaryotic type
Other ribosome biogenesis factors
PITG_04426
Translation factors [BR:
pif03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
PITG_04426
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
AAA_30
AAA_19
NAT10_TcmA_helicase
zf-AN1
Viral_helicase1
DEAD
ResIII
AAA_22
AAA_16
ATPase
nSTAND3
PhoH
nSTAND_NTPase5
Flavi_DEAD
AAA
TPR_30
LPD11
Motif
Other DBs
NCBI-GeneID:
9466286
NCBI-ProteinID:
XP_002906045
UniProt:
D0N184
LinkDB
All DBs
AA seq
988 aa
AA seq
DB search
MPKKANASAASAGARALRPVALETWLASTRRLLSMEQQEEVQTMRDELETLDDNENPNVL
THLTLARYSTGLFGRTLLQFSFPSLSLRQAKPHQFTVGDLVQIRAQKNTLTGAKLPTGIV
SRVEERGISVAVNSDQEDVDEVELLTATAGVTLDRLVNNATFLKLTSALDQMTKFEFGAA
QTVVDVVFSEREPSWNTPLPDITPFNTGLNESQVEAVRFALASKDLALIHGPPGTGKTTT
VVEFILQAVTRFDLKVLVCAPSNIAVDNVLDKLASTCSTLRKKLKLTRIGHPARVLPQIL
NYCLDAKIESAEGTEIVNDIRQEMSSMQKKLQKTRDKSERYRLRREMKANRKEIRTREQK
VVGDIIRHSDVVFATNVGAASKLLKDVTFDLVIIDEAAQALEASCWIPMLKAKRCVLAGD
HLQLPPTIKSRAAAAKGLEVTLFDRVTSYTNTQSIVKMLDTQYRMHQDISEWSSQAMYKG
ELKSFEGVARRKLHELPHVSISKEDELLDATLLLLDTAGCELEEDAKDEEKASSTLQLSK
SNEGEAHVVARHVSALLKAGLKEEEVAVITPYNKQVQTLKALLLESYPKLEIRSVDGFQG
CEKEAVVMSLVRSNASRQVGFLADDRRMNVAITRAKRHVAVVCDTDTISSHKFLSGLVKH
FEKYGEYRSAQEYLDEDVVEGAMDEQLVMSITESAAESDQADAVTASSSLKPIAKTKVTK
PKQAQKPRKTGSSSAVKVVDRKKTASNDEKPEAAEATAIEPAVAVQEEEEEEEIEDKAVA
TKSVFQMMVFDSDSSDDDNDEAVDVEVSQQESKASSPDEDLKAASSLLKDLYLSRLARQP
APPAPTSDKRKKKKNKRKKTQVKAVNTAPIDDLKDGEDELEFLTRQANQSSSCAFQSSSR
CKKKTTMLGSVCKFCKLKFCHDHALPEVHGCGDAVRKFERAAFQQQMTRSSDTSGKKLTG
DKRKLLKKKLEENVSAKTASRSTRAKKK
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaaggccaacgcgtcggcggcgtctgcgggcgctcgtgccctgcgtccagtg
gctctagagacatggctggcatctacacgtcgtctcttgtctatggagcagcaggaggag
gtgcagaccatgcgggacgagctggaaacgctcgacgacaacgaaaacccgaatgtattg
acacatttgactcttgcacgctactccacgggactattcggacgcaccctgctgcagttc
tcgttcccttcgcttagtttacggcaagcaaagccacaccaattcacagtgggggattta
gtgcagatccgagcgcagaaaaacactctaaccggagccaaactacccactggaatcgtg
tcccgtgtcgaggaacgaggcatctctgtggctgtcaatagcgaccaagaagacgtggat
gaagtggagctactgaccgcaacagcaggcgtcacactggaccgcctagtgaacaacgca
acgttcctcaagttgacgagcgctctggaccaaatgaccaagttcgagttcggcgcagct
cagacggtagtggacgtcgtgttctcggagcgcgagccgagctggaacacaccacttcct
gacataacgccctttaatacaggtctaaacgagtctcaagtggaggcggtaagattcgca
ctggcgtccaaggacttggctctcattcacggccctccaggaaccggcaagacgacgaca
gtggtggagtttatactgcaggcagtgaccagattcgacctaaaggttttagtctgtgct
ccgtcaaatatcgccgtggataatgtgctagacaagctggcgagcacgtgttcgacgctt
aggaagaagctgaagctcacacgtataggacaccccgcgcgagtgctgccgcagatactg
aactactgtttggatgccaagatcgagagtgcagaaggcaccgagatagtgaacgacatc
cgccaggaaatgagctccatgcagaaaaagctgcagaagactcgagacaagagcgaacgg
taccgattacgacgcgagatgaaggccaatcgcaaggagatccggactcgagagcagaag
gtggtgggcgacatcatccgacacagtgacgtcgtgttcgcgaccaacgtcggcgcagcg
tcgaagcttctcaaggacgtgacgttcgacttggttatcattgacgaggcggcgcaggca
ctcgaggcgtcgtgttggatccccatgctgaaggccaagcgctgcgtgttggctggggat
cacctacagctccctcccaccatcaagtcgagggcagcagcagccaaaggactggaagtg
acgctgttcgatcgggtcacaagctacacgaacactcagagcatcgtcaagatgctggac
acgcagtaccgaatgcaccaagatatcagcgagtggagctcccaggcgatgtacaaggga
gagctcaagagcttcgagggcgtcgcgaggcgcaagttgcatgagctgccgcacgtctcg
atctctaaagaagacgagttgctggatgccacgttgttgctgctggacacggcgggatgc
gagcttgaggaggacgcgaaggacgaagagaaggctagcagtacccttcagctgtccaag
tcgaacgagggggaagctcacgtcgttgcgagacacgtgagtgctctattgaaggctgga
ttgaaggaggaagaggtcgctgtgatcacgccgtacaacaagcaggtgcagactctgaaa
gctctgctgcttgagagctacccgaagctcgaaatccgatctgtggatggcttccagggc
tgcgagaaggaggcagttgtcatgagtctggtgcgctccaatgcctcgagacaggtaggc
ttccttgccgacgatcgccgtatgaatgtagccatcacacgtgcgaaacggcatgtagca
gtagtgtgtgataccgacaccatctcgtcgcacaagttcctgagtggattagtgaagcac
tttgagaagtacggagagtaccgaagtgctcaagagtatctggacgaagatgtcgtcgaa
ggagcaatggacgaacaactcgtcatgtcgattacagagtcagcagctgaaagcgaccag
gctgatgcagttacagcgtcttcttctttgaagcctatcgcgaagactaaagtcacaaaa
cctaaacaagcgcagaagcctaggaagacaggttctagcagcgctgtgaaggtggttgac
aggaagaagacagcgtccaacgacgagaaaccggaggcggcggaagcgactgcaatagaa
cctgctgtcgctgtacaagaggaggaggaggaggaagagatagaggacaaggctgtagcg
acgaagagcgtgttccagatgatggtgtttgatagcgacagctccgatgacgacaatgat
gaagcagtggacgtcgaggtcagtcaacaagagtccaaggcgagcagtccggacgaagat
ctcaaggctgctagctcactgttaaaggatctgtacttgagtcgactcgctcgccaacct
gcgccaccagcaccgacgtcagacaagaggaagaagaagaaaaacaagaggaagaagacc
caagtcaaggctgtcaacaccgcccccatagacgacctgaaagacggagaagatgagctg
gaattcctcacgcgacaagccaaccagagctcgagctgcgcgttccagagctccagtcgc
tgtaagaaaaagacgaccatgttgggcagtgtctgcaagttctgcaagctcaaattctgc
cacgaccacgcgctgcccgaagtgcacggctgcggggacgctgtgcgaaagtttgagcga
gccgcgttccagcagcaaatgacgcgctcaagcgatacgtcgggcaagaagctcaccggg
gataaacgcaaactgctcaagaagaaattggaagagaatgtttctgctaaaaccgcgagt
cggtccacaagagccaagaaaaaatag
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