KEGG   Phytophthora infestans: PITG_04499
Entry
PITG_04499        CDS       T01333                                 
Name
(RefSeq) histone deacetylase, putative
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
pif  Phytophthora infestans
Pathway
pif03082  ATP-dependent chromatin remodeling
pif03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:pif00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    PITG_04499
   03083 Polycomb repressive complex
    PITG_04499
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pif03036]
    PITG_04499
Enzymes [BR:pif01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     PITG_04499
Chromosome and associated proteins [BR:pif03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     PITG_04499
   HDAC complexes
    Sin3A-HDAC complex
     PITG_04499
    BRAF-HDAC complex
     PITG_04499
    REST complex
     PITG_04499
    SHIP complex
     PITG_04499
    MiDAC complex
     PITG_04499
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     PITG_04499
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    PITG_04499
  Chromatin remodeling factors
   NuRD complex
    PITG_04499
SSDB
Motif
Pfam: Hist_deacetyl CATRA-N
Other DBs
NCBI-GeneID: 9475531
NCBI-ProteinID: XP_002905282
UniProt: D0N1E4
LinkDB
AA seq 447 aa
MSSTNGSSVANTSGGTVASKRRVAYFYDSEIGNYHYGQNHPMKPHRVRMAHNLITNYGLT
KHMEVFRPRLVDWMELTRFHSDDYIHFLRLVTPDNMHEYLRQLQRFNVGEDCPVFDGLFE
FCQLYASASIGGAAKLNAGSADIVINYSGGLHHGKRSEASGFCYVNDCVLGILELLKAHQ
RVLYIDIDIHHGDGVEEAFYTTNRVMTCSFHKYGEFFPGTGDIKDIGYGDGKHYSVNFPC
RDGMDDESFTGIFRSVIAKVMEHFAPGAVLLQCGTDSLSGDRLGSFNLSAKGHADCVAYV
KSFNIPTLVVGGGGYTLRNVARAWCYEASLLVDVDIPDAMPYNDYFEYYGPEYRLHLPVS
NMENLNTPAYLDEIKRQIHENLRQIEPVPSVPFTVAPPSARIQEEKEAAARDREDDDQHM
MDVSGERQDQQELKQSDAPRHPVEFYD
NT seq 1344 nt   +upstreamnt  +downstreamnt
atgagcagtaccaacggcagttccgtggcgaacaccagcggcggcaccgtagcttccaag
cgtcgcgtggcatacttctacgactcggagattggcaattaccactacggacagaaccac
cccatgaagccacatcgcgtgcgaatggcacacaacctcatcaccaactatggactcacc
aagcacatggaagtcttccgtcctcggctggtggactggatggaactcacccgcttccac
tcggacgattatatccacttcttgcggctcgtgacacccgacaacatgcacgagtatctg
cgccaattgcaacgcttcaacgtgggtgaggattgcccagtctttgatggtctcttcgag
ttctgccaactctacgcgtcggcatcgatcggcggcgctgctaaattgaacgcgggatcg
gccgacatcgtcatcaattactccggtggtctacatcacggcaagcgctcagaagcgtcc
ggtttctgctatgtgaacgactgcgtgctcggtattctggagctgctaaaagcccaccaa
cgcgtcctgtacatcgatatcgacatccaccacggtgacggagtggaggaggcattttac
acgacgaaccgggtgatgacttgctcattccacaaatacggcgagttcttccccggcacg
ggcgatattaaagatatcggctatggagacggcaagcattactctgtcaactttccgtgc
cgcgacggcatggacgacgagagctttaccggtatctttcgcagcgtcattgccaaggta
atggagcattttgcgccgggtgctgtgctgctgcagtgcggcacagactcgctttctggt
gacagacttggcagcttcaacctgtcagccaagggccacgccgactgcgtggcgtacgtc
aagagctttaacatccccactcttgttgtcggcggcggtggttatacattgcggaatgtg
gcacgtgcctggtgctacgaggcatcgctgctggtggacgttgatatcccagatgcgatg
ccctacaacgactactttgagtactatggacctgagtaccgcctacacttgcccgtgagc
aacatggaaaacctcaacacacccgcttacctggacgaaattaagcgtcagatccatgag
aacctccgccaaatcgaacctgttcccagtgtgcctttcacagtcgcaccaccgtcagct
cgaattcaagaggagaaggaagctgccgcgcgcgaccgtgaggatgacgatcagcacatg
atggatgtgtcgggcgaacgtcaagaccaacaagaactcaagcagagcgacgctccccgt
catcctgttgaattttacgactaa

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