Phytophthora infestans: PITG_05679
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Entry
PITG_05679 CDS
T01333
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit, putative
KO
K07466
replication factor A1
Organism
pif
Phytophthora infestans
Pathway
pif03030
DNA replication
pif03420
Nucleotide excision repair
pif03430
Mismatch repair
pif03440
Homologous recombination
pif03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PITG_05679
03420 Nucleotide excision repair
PITG_05679
03430 Mismatch repair
PITG_05679
03440 Homologous recombination
PITG_05679
03460 Fanconi anemia pathway
PITG_05679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pif03000
]
PITG_05679
03032 DNA replication proteins [BR:
pif03032
]
PITG_05679
03400 DNA repair and recombination proteins [BR:
pif03400
]
PITG_05679
Transcription factors [BR:
pif03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
PITG_05679
DNA replication proteins [BR:
pif03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
PITG_05679
DNA repair and recombination proteins [BR:
pif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
PITG_05679
MMR (mismatch excision repair)
PITG_05679
DSBR (double strand breaks repair)
HR (homologous recombination)
PITG_05679
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
Motif
Other DBs
NCBI-GeneID:
9475394
NCBI-ProteinID:
XP_002999298
UniProt:
D0N3F2
LinkDB
All DBs
AA seq
629 aa
AA seq
DB search
MVNLTPNAVSMLYHNQVPDGFEPWLQIIDTKKIKPASGTGGDRYRIVLSDGTSYLSGMLA
TQLAPMMENESLKTNYVLQLKDYLGNEVQGRRIIIVLKVGNIVPHFDCIGSPQNIDGSRG
PSVPAASSASVPPAAALGARSAAPAQPSYQQPRAPTNQFQQPPAAPSSYTPPTKPAASTY
NRGPVVRQDPNIRLSDIQSLNPYAGGRWTIKARVTTRSPIKNWTNSRGSGKLFSVDLLDA
KKGEIRATFFNDGVDKFYEMLRPGGIFYFAGGKVKMTNRRFSSVDNDYEVTFDPHSDISP
APEDGQISQMQYAFKKIAEIENVPADSNVDIIGIVRDVTPVNEFTSKAGKQLFKRDISLV
DDSNVEIKCTMWNEQAQQECSNWLNQVLAIKGCRVSEFNGRSLSTAGSSSFTVNPTIPEA
GHLVTWFSNGGNATQTKSLSSGGGGFGGGSLGSFSERAVINDIKSKQLGFGQKPDYITVK
GTVNFIKHDTGIYYQACPKCQKKVVADVAQNYTCEKCQTSYPNCENRYILSVIMLDHTGS
TWTTCFNDQGKVVMGGRTADEIGELRDTNPALFESIFKEALFKQYVCRLRVKAENVQEEL
RVKASVVNLEPVNFVQESKDLLQAIAQYN
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacctcacgcccaacgctgtgtcgatgctgtaccataaccaggtacccgatggc
ttcgagccgtggctgcagatcattgacaccaagaagatcaagccagccagcggcacgggt
ggcgatcgataccgcatcgtgctatccgacggtacctcatatcttagtggaatgcttgcg
acgcagctagctccgatgatggagaacgagagtctcaagacaaactacgtgcttcagctc
aaggactacctcggtaatgaagtgcaaggccgtcggatcattatcgtgcttaaggtcggc
aacatcgtgccgcactttgactgcattggatcgccccagaatatcgatggttccaggggt
ccttctgttcctgcggcttcatcggcctctgtcccacccgcagcggctctcggagcgaga
tcggctgcacctgcacagccttcgtaccagcagccccgagctcctaccaatcagttccaa
cagccacctgctgctccgtctagctacacgccacctacgaagcctgctgcatctacgtat
aaccgtggacctgtcgtgcgtcaagacccaaacattcgtctgtcggatatccagagtctg
aacccgtacgcgggcggacggtggaccatcaaggctcgtgtgacgacgcgctctccgatc
aagaattggaccaattctcgcggctccggtaagctcttcagcgttgacttgcttgacgcc
aagaaaggtgagattcgtgccactttctttaatgacggtgtggacaagttctacgaaatg
ctgcgtccgggtggcattttctacttcgctggtggcaaggttaagatgaccaatcgtcgc
ttctcgtcggtggacaacgactacgaggtgactttcgacccgcattcagacatttcccca
gccccggaagatggtcagatctcgcagatgcagtacgccttcaagaaaatcgccgaaatc
gaaaacgtgccggccgattctaatgtggatatcattggcattgtgcgcgacgtcactcca
gtgaatgagttcacgtccaaggccggcaagcagcttttcaagcgtgacatttcgctcgtt
gatgactccaacgtggagatcaagtgcactatgtggaatgagcaagctcagcaggagtgc
tctaactggctcaaccaagttttggctattaagggctgccgtgtaagtgaattcaacggg
cggtccctcagcacggcgggaagctcgagctttactgtcaatccaacgatcccggaagcc
ggacacctggtcacgtggttctccaacggtggcaatgcgacgcagacaaagtctctcagc
tccggtggtggtggctttggcggtggttcgcttggcagcttttccgagcgtgcagttatc
aacgatattaagagcaagcagcttggctttggtcagaagcccgattatatcactgtaaag
ggaacggtgaatttcatcaaacatgacacgggcatttactaccaagcgtgccccaagtgt
cagaagaaggttgttgctgacgtggctcagaactacacgtgcgagaaatgccagacttcc
taccccaattgcgagaaccgctacatcctttcggtgattatgctagaccacaccggcagc
acctggacaacatgcttcaacgaccaaggcaaggtggtgatgggtggtcgcacagcggat
gaaatcggcgagcttcgtgacaccaacccagcactttttgagtccattttcaaggaggcg
ttgttcaagcagtatgtctgccgacttcgcgtgaaggctgagaatgtgcaggaggaactt
cgtgtgaaggcaagtgttgtgaacttggagcctgtcaactttgtgcaagagtcgaaggat
ctgctccaagctattgcccagtacaattaa
DBGET
integrated database retrieval system
