Phytophthora infestans: PITG_06171 Help Entry PITG_06171        CDS       T01333                                  Name (RefSeq) splicing factor 3B subunit 1   KO K12828   splicing factor 3B subunit 1 Organism pif  Phytophthora infestans Pathway pif03040   Spliceosome Brite KEGG Orthology (KO) [BR:pif00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     PITG_06171  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:pif03041]     PITG_06171    03036 Chromosome and associated proteins [BR:pif03036]     PITG_06171 Spliceosome [BR:pif03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     PITG_06171  Complex B     PITG_06171  Complex C    U2 SnRNP specific factors     PITG_06171 Chromosome and associated proteins [BR:pif03036]  Eukaryotic type   Chromatin remodeling factors    B-WICH complex     PITG_06171 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ Htt_N-HEAT_1 HEAT_2 HEAT_EF3_N XMAP215_CLASP_TOG TIP120 Motif Other DBs NCBI-GeneID:  9472324 NCBI-ProteinID:  XP_002998343 UniProt:  D0N488 LinkDB All DBs AA seq 1235 aa AA seqDB search MAEKDEKVGVGLSSTGQFDQDIYGSSRDRFSGYSATVTEEGDEGDHEQRADDHHSRAKKT QPNDGLIDDNYDPFAEAREANGSGLVNTRIVDRENAYRKRRFERMLSPERGDAFGDKTPA RSYKEIMQTQQLEQERAEVVRKIQQKREEQEQQQTQSQELQEMDATPKRRRKRMRWDQEA PEKTDGESQSEWDTASESSSSSLAATPSRTASRWDATPVSGSAVGATPGRKNRWDETPVA NSGSSKWDATPVNLGGVTPAGTGKRSRWDETPVSGPNDMATPGKSVQMTPGGSLAADIMS GALTPELAQRLRWEREIEERNRPLADEELDALFPATGYKILDPPASYVPIRTPSRKLLAT PTPMGQTPGFAMQATPAREDYGVPVGTPSGGDGTMPFIKPEDYQYFGKLMDEVDEENLDP EAAKERKIMRLLLKIKNGTPPQRKTALRQLTDKAREFGAGALFNQILPLLMAPTLEDQER HLLVKVIDRVLYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATM ISTMRPDIDIDDEYVRNTTARAFAVVASALGIPALLPFLKAVCQSRKSWQARHTGIKIVQ QVAILMGCAVLPHLKHLVEIIEHGLEDDQKVRTITALALAALAEAAHPYGIESFDSVLRP LWRGTRKHHGKGLAAFLKAIGFIIPLMDAQYANYYTVEVMEILIREFQSPDEEMKKIVLK VVKQCVSTDGVEASYVKEKILPEFFRHFWVRRMALDRRNYRQLVETTVELANNVGASEII SRVVDDLKDESEPYRRMVMEAIQKIISNLGATDIGTDLEEKLIDGILYAFQEQTSDDTFV MLNGFGIVVNALGIRAKNYLPQICGTIKWRLNNKPAKVRMQAADLINRIAVVMKTCDQEP LMGHMGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMSKMTPPIKDLLPRLTPILKNRHE KVQENCIDLVGRIADRGADLVSAREWMRICFELLDMLKAHKKGIRRAAVNTFGYIAKAIG PQDVLHTLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVVPALMNEYRVPELNVQNGVLK AFSFMFEYIGEMGKDYIYAVAPLLQDALMDRDLVHRQTACTTVKHLALGVAGLGCEDALV HLLNFVWPNIFETSPHVINAVFEAVEGCRVALGPHVILQYVLQGLFHPARRVREVYWKIY NSLYMYAQDGLTPAYPVLEDDGVNSYNRTYLELCI NT seq 3708 nt NT seq  +upstreamnt  +downstreamnt atggcggagaaggacgagaaggtgggcgtgggtctgtcctccacggggcagttcgaccag gatatctacggctccagtcgtgatcgcttctctggctacagcgcgacagtcacagaagag ggagacgagggtgatcatgaacaacgtgcagatgaccatcactctcgagccaagaaaacg cagcctaatgacgggcttatcgacgacaactacgacccgttcgccgaggcacgggaagcc aatggatcaggactcgtcaacacgcgcatcgtggaccgcgagaacgcgtaccgtaagcgg cgtttcgagcgcatgttgtctcccgagcgcggcgatgcctttggggacaagacaccggca cgcagctacaaggagattatgcagacgcagcaactggaacaggaacgcgctgaagtagtg cgtaagatccagcagaaacgcgaagagcaggagcaacagcagacacagagccaagagcta caagaaatggacgcgacacccaagagacgacgtaagcggatgcgttgggaccaggaagcc ccagagaagacagatggagagagtcaatccgagtgggacactgcctctgagagctcgtcc agctccctggctgctacaccctcccgtacggcgtcaagatgggatgccacacctgtctcg gggtctgcggtgggcgctacacccggcaggaagaaccgctgggatgaaacaccagtggca aacagtggatcgtccaaatgggacgccacgcctgtgaatctgggcggtgtgactcctgca gggacaggcaagcgctcacggtgggatgagacccctgtctcgggtccaaatgacatggct acacctggaaaaagtgtacagatgacacccggtgggtccttggctgcagacatcatgagc ggagcgctgacaccggagctagcgcagcgtctgcgctgggaacgggagatcgaagagcgc aatcgacccctggcggatgaggagctggacgcactgttccctgctacaggatacaagatt ctggaccctcctgcatcgtatgtgcctattcgcacgccgtcacggaagctgcttgccact ccgacgccgatgggacagacgccaggcttcgcgatgcaagctacacccgcgcgtgaagac tacggcgtgcctgtcggtaccccgtcgggtggtgatggcaccatgccgtttattaagcca gaagactaccagtactttggcaaattgatggacgaggtcgatgaagaaaacttggaccct gaggctgccaaggagcgcaagatcatgcgcttgttgctcaagattaagaacggtacgccg ccgcaacgtaaaactgcgctgcgtcagcttacagacaaggcgcgtgagtttggtgctgga gcgttgttcaaccagatcttgccgttgcttatggctcccacactggaggaccaggagcgt cacttgctggtcaaagtaattgaccgcgtgctgtacaagcttgacgacctggttcgtccg tacgttcacaagatcttggtggtgattgagcctctactgattgacgaagactactacgcg cgtgtggaaggccgtgagatcatctcgaaccttgcgaaggctgccggactggcgacgatg atttccacgatgcgtccggatatcgatatcgacgacgagtatgtccgtaacacgacggca cgtgcctttgccgtggtggcctcagcgctgggtattcctgccttgctgccgttcttgaag gcggtttgccagtcgcgaaagtcgtggcaagctcgacacacgggtatcaagatcgtgcaa caggttgcgatccttatgggctgcgctgtactgccgcatcttaagcacctcgtagagatc atcgagcacggtcttgaagacgaccaaaaggtgcgtactatcactgctctggctctggct gcactcgctgaagctgcgcatccgtacggcattgagtcgtttgactcggtgttgcgtccg ctgtggcgtggtacgagaaagcatcatggcaaggggttggcggcgtttctgaaggccatt ggcttcattatccccctcatggatgcacagtatgcgaactattacacggtggaagtgatg gagatcttgattcgtgaattccagtcgcctgatgaagaaatgaagaagattgtgctgaag gtggtgaagcaatgtgtctctactgacggcgtggaagcttcgtacgtcaaggaaaagatt ttgccggagtttttccgacacttctgggttcgacgtatggcgctggaccgacgcaactat cggcagctagtggagacgacggtggagcttgcgaataacgtgggagcgagcgagattatc tcgcgagtggtggatgacctcaaggatgagagtgaaccgtaccgccgcatggtcatggaa gcgatccagaagattatctcgaatttgggcgctacggatatcgggacggatctcgaagag aagctgattgacggcatcctgtatgccttccaggagcaaacgtccgacgatacgtttgtc atgctgaatggctttggcattgtcgtgaacgcgcttggaatccgcgcgaagaactacttg ccgcagatttgcggtaccatcaagtggcggctgaataacaaaccggcgaaggttcgcatg caagcggctgacctgattaaccggattgccgtggtcatgaagacgtgcgatcaggagccg ttgatgggacacatgggtgttgtgctgtacgagtatcttggagaagagtacccggaggtg ctgggtagcattctgggagcgctcaaagctattgtcaatgtgatcgggatgagtaaaatg accccgccgatcaaggatctgctgcctcgacttactccgatccttaaaaatcgccacgag aaggttcaagagaactgtatcgacctcgttggacgtattgccgaccgtggcgcggacttg gtatcagctcgagagtggatgcgcatctgtttcgaactcctggatatgcttaaagcccac aagaaaggcatccgtcgtgctgctgtcaacacgtttggatacattgccaaggcgattggt cctcaggacgtgctgcacactttgctgaataatttgaaggtccaagaacgacagaatcgt gtgtgtactactgtagccattgctattgtggccgagacgtgctcgccgttcaccgtggtg ccagctcttatgaacgaataccgtgtgccagagctgaatgtgcagaacggtgtgctaaag gcgttctcgttcatgttcgagtacattggagagatgggcaaggactacatttacgcggtg gctccgctactgcaggacgcgctgatggaccgcgacttggtgcatcgtcaaacggcgtgc acgacggtcaagcatttggcgctgggtgttgctggtttgggttgcgaggatgcgctggtg cacctgctcaactttgtgtggccgaacatttttgaaacgtctccgcacgtgatcaacgcg gtgtttgaggccgtggaaggctgtcgcgtggcgttgggtccgcacgtgatcctgcagtat gttctacagggcctgttccacccggcgcgccgcgtgcgtgaagtctactggaagatctac aactcgctgtacatgtacgctcaggacggactgacacccgcctacccggtcctggaggac gacggcgtaaactcgtacaaccgcacctacctggagctttgcatttag

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