Phytophthora infestans: PITG_07110
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Entry
PITG_07110 CDS
T01333
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
pif
Phytophthora infestans
Pathway
pif03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PITG_07110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pif03021
]
PITG_07110
03019 Messenger RNA biogenesis [BR:
pif03019
]
PITG_07110
Transcription machinery [BR:
pif03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
PITG_07110
Messenger RNA biogenesis [BR:
pif03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
PITG_07110
U7-dependent histone pre-mRNA processing factors
PITG_07110
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
HK-GC-Chemotax_sensor
Motif
Other DBs
NCBI-GeneID:
9464071
NCBI-ProteinID:
XP_002905073
UniProt:
D0N7A6
LinkDB
All DBs
AA seq
724 aa
AA seq
DB search
MSKRRLAEEAADERHIMRIMPLGAGNEVGRSCIVLKFKGKTIMLDCGVHPGYSGHGSLPF
FDGVEAEEIDLLLITHFHIDHVAALPHFTEKTNFKGRVFMTHPTKAVMQMMLRDFLRVSN
ISVDDQIYDDKDLNNCVSKVEIIDFHQEMMHNGIKFTPYNAGHVLGACMYLIEIGGVKVL
YTGDYSLENDRHLMAAELPACSPDVLIVESTYGVQVHQSVVEREGRFTGQVEAVVRRGGR
CLIPVFALGRTQELLLILDEHWRSHPDLQDIPIYFASKLAAKALRVYQTYINMMNDRIRK
QIAISNPFQFEHISNLKSMDDFDDSGPSVVMASPGMLQSGVSRQLFERWCSDKRNACLIP
GYVVEGTLAKKILSEPTEIAALDGRIIPMNCTVEYISFSAHADFVGTSGFVEKLTPPNIV
LVHGEKNEMMRLKSALNKKFNDPKVYHPSISTPANMQEIVLEFKGEKIAKAIGGLASNQP
KNGTIISGLLVEVDSQTHLMDKEDLSTYTKLISGTITQKQHVPFEYNSFDVLITFIRQMY
EDVVHLEKENRVAVCKQVVVTRCAVAKGATEKLVVEWTSAPTADMIADSLIALAMHAQAS
PASFKLSNQPTAACPHDHSKKTNTEDEANGKKDTTDLEKAARELGGADQDALNLLIVFRL
LKDQYGDVDLDFETNKIHVRTPSGVDAVVDHASQEVECKDATLKLKLQTTIQRIEGALKP
IATS
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcgccgactggccgaggaagccgcggatgagcgccacatcatgcgcatcatg
ccgctgggcgccggcaacgaggtgggtcgctcttgcattgtgctcaagttcaagggcaag
accatcatgctagactgcggcgtgcacccaggctactctggtcacggtagtctgcccttc
ttcgacggcgtggaggccgaggagatcgacctgctgctcatcacgcacttccacatcgac
cacgtggctgcactgccgcatttcaccgagaaaacgaacttcaaaggccgcgtattcatg
acgcaccctacaaaggccgtgatgcagatgatgttacgcgatttcctgcgtgtatccaac
atctctgtggatgaccagatttatgacgataaagaccttaacaactgcgtctccaaggtc
gagatcatcgatttccaccaagagatgatgcacaatggcatcaagtttacgccttacaac
gctggtcatgtactgggggcgtgtatgtacctcatcgagattggaggcgtcaaggtgctc
tacacaggagattattcgctcgagaatgaccgtcatctcatggcagctgagctaccagct
tgttcgcccgatgtgctcattgtggagtccacatacggtgtgcaagtacaccagtccgta
gtggagcgtgaaggacgctttacagggcaagttgaggctgtagtgcgtcgtggaggtcgc
tgtctgatcccagtgttcgctctggggcgtacccaggagctactactgattctagacgag
cattggcgctcacacccggatctacaggacattcccatctactttgcgtccaaattggca
gccaaggctctgcgtgtgtaccagacatacatcaacatgatgaacgaccgtatccgcaag
cagatcgccatctcgaacccgttccagttcgaacacatctcgaacctcaagagtatggat
gatttcgacgactctgggccgtctgtagtgatggccagtcccggtatgctgcagagcgga
gtctctcgacaactcttcgagcgttggtgctcggataaacgcaatgcctgcttgattcct
ggctacgtggtcgaaggtacgttagctaagaagattctgtccgagccgacggagatcgcg
gcgttggatggtcgtatcatcccgatgaactgcacagtcgagtacatttccttctcggca
cacgcagacttcgtgggtaccagtggatttgtggagaaactcacaccgcccaacattgtg
ctggttcacggcgagaagaacgagatgatgcggctgaagtcagcgttgaacaagaagttt
aacgacccgaaagtctaccatccgagtatctccacaccagccaacatgcaggagattgta
ctcgagtttaaaggagagaagatcgccaaggctattggaggtttggccagtaatcagcca
aagaatggaacaattatctctggtctcttggtggaggtggactcgcagacgcatctgatg
gataaggaagatctctcgacgtacacgaagctcatttccggtacgattacgcagaagcag
cacgtgccattcgagtacaactcgttcgacgtgttgatcacgtttattcgtcagatgtac
gaggatgtggtgcatctggagaaggagaaccgtgtcgcggtgtgcaagcaggtggttgtc
acgcgttgtgctgtggctaaaggtgcaactgagaagctggttgtggagtggacgtctgcc
cccaccgctgatatgattgcagactcgttgatcgctctcgctatgcacgcacaggccagt
cctgctagtttcaagctgagtaaccagccgacagctgcgtgtccgcatgaccactcgaag
aagacgaacacggaggatgaagcgaatggcaagaaggacacaacagatctggagaaggca
gcacgggagctgggtggggctgaccaagatgcgttgaacctgttgatcgtgttccgtcta
ctgaaggatcaatatggagacgttgacttggacttcgagaccaacaagattcacgtgcga
acaccgagcggtgtcgacgctgtggttgatcacgcgtcacaggaggttgaatgcaaggac
gcgacgctcaaactcaagctgcagacgacaattcaacgcatcgaaggagcgctcaaaccc
attgcgacgtcgtga
DBGET
integrated database retrieval system
