Phytophthora infestans: PITG_07311
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Entry
PITG_07311 CDS
T01333
Name
(RefSeq) DEAD/DEAH box RNA helicase, putative
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
pif
Phytophthora infestans
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pif03009
]
PITG_07311
Enzymes [BR:
pif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PITG_07311
Ribosome biogenesis [BR:
pif03009
]
Eukaryotic type
90S particles
Helicases
PITG_07311
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
9471720
NCBI-ProteinID:
XP_002905243
UniProt:
D0N7S6
LinkDB
All DBs
AA seq
709 aa
AA seq
DB search
MSSTFFGALTQGAKFGGTKFQRDKQQFKQLTKCQGPNKATKKTADVNELDFFGFDAAPKP
KEKAPKPQKISVDMVPEWAGNDPSSKTRKVNGSKPRRKRKLSEGALEEQRLEDEARQQAS
QLLAPPKTKTDKRKEKRARRRSRTESMGSEATSQQSDEESEAASDSDEEEDEAAVTLFKS
NDEDAGEAKTDAKIAKKKKKDTKKTDKKNTAAAEQDGVQMLRRQLGIRVSGVSVPAPITS
FADMRLDSSASAQQMKRLLLQNIERSEYKEPTSVQMQAIPSLLLRRDVLATAPTGSGKTA
AFAIPILANLAAGSGTSSGIRSIVLAPTRDLAVQIRAEFTRLAAGKKLHITLLSKATAAT
IASQTKSKLAVNHDVLIATPLRLVHLIQESKVDLSTVEMVCLDEADRLLELGFVEQVDEI
FAACTHPKVQRAMFSATMLEGVEELAQTVLRDPVKVAVGTKNAGASTIDQKLVFVGKEEG
KLVAMKQLLQQGLQLPALLFVQNKERANELYHELLYDGVNIGAVHADRTKEQRDDVIRRF
RTGEVWVLICTDLMSRGMDFKAVNMVINYDFPQSAVSYIHRIGRTGRNGRKGKAVTLFTE
DDMVYLRTIANVMKISGCEVPDWMLSLKKASVSKRKELLKAPPMRHRINTVSGYDLQRAN
RLKQMKQGKTTPKKDGEQSESDPAKLEASAKTGEGKKKRKKHKKNPTNE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcacctttttcggagcgcttacacagggcgccaagttcggcggtaccaagttc
cagagggacaagcagcaattcaagcagctcaccaaatgtcaggggccgaataaagcgacc
aaaaagacggcggacgtgaacgagctagactttttcggcttcgatgcagccccgaagccc
aaggagaaggcacccaaacctcaaaagatcagcgtcgacatggtaccggagtgggcaggt
aacgatccatccagcaagacgcgcaaggtgaatggaagtaagcctcgtcgcaagcgcaag
ctgagtgaaggtgcgctagaagagcagcgtctggaggacgaggcgcgacagcaagcgtcg
cagttgctcgctccgcccaagactaagactgacaagcgaaaggagaagcgcgcacgtcgt
cggtcacgcacggaatcgatggggagtgaagcaacatcacagcagtcggacgaggagtct
gaggcagctagtgacagcgatgaggaggaagacgaggctgctgtgactctattcaagtcc
aacgacgaggacgcgggcgaggcaaagactgatgcgaaaattgcaaagaagaagaagaaa
gacaccaagaagactgacaaaaagaatactgctgctgctgaacaggacggagttcagatg
cttcgacgtcagcttggtattcgcgtgagcggcgtgagtgtgccggcaccgattacgtca
ttcgctgacatgcgcttggactcgagtgcgagtgcgcagcagatgaagcgtctactgctc
cagaatattgagcgctccgagtacaaggagcccacgtctgtgcagatgcaagccatccca
agcttgttactccgacgcgacgtgctggccacggcgcctacaggctccggtaagactgca
gcttttgcgatcccgatcctagcgaacctggcagctggtagcggaacaagtagcggtatc
cgctcgatcgttctggctcctactcgcgacttggcggtgcagattcgagccgagtttaca
cgcctcgcagctggcaagaagttgcacattacgctgctatctaaagctacagcagcgacc
attgcgtcgcaaaccaagagcaagctggcggttaaccacgacgttctgattgccactccc
cttcgactcgtacacttgatccaagaatcgaaagttgatctgtcgaccgttgaaatggtg
tgtttggacgaggctgacagactgctggagctgggatttgtggagcaggtcgatgagatt
tttgctgcctgtactcacccgaaggtccagcgagccatgttcagtgcaacaatgctggag
ggggtcgaggaattggctcaaactgtgctacgtgaccctgtcaaggtggctgtgggcacg
aagaatgctggcgctagtacgatcgaccagaaactggtgttcgtgggcaaggaggaagga
aaacttgtcgccatgaagcaattgctacaacaaggactgcagcttccggcgctgctgttt
gtacagaataaggagcgtgccaacgaactgtaccacgaattgctgtatgatggagtgaat
attggagctgtgcacgcagatcgcaccaaggagcagcgtgacgatgtgattcgacgattt
cgtactggcgaagtgtgggtgctcatctgcacagacctcatgagtcgtggtatggacttc
aaggcggtcaacatggtcatcaactacgatttcccgcagagcgcggtgagttacattcat
cgtatcggtcgtactggtcgaaacggacgcaagggcaaggctgtcacgctcttcaccgaa
gatgacatggtgtatctgcgtacgatcgcgaacgtgatgaagatatcgggctgtgaggtc
cccgactggatgctgtcgctgaagaaggctagtgtatcaaagaggaaggagcttctgaag
gcaccacccatgcgtcatcgtattaacacggtgtcgggatacgatctccagagggcaaac
cgtctgaagcagatgaagcagggaaagacaacgcccaagaaagatggggagcagtctgag
tcggatccagctaagctggaggcatctgcgaagactggagagggcaaaaagaagcgtaaa
aaacacaagaagaaccccacgaacgagtga
DBGET
integrated database retrieval system
