KEGG   Phytophthora infestans: PITG_07852
Entry
PITG_07852        CDS       T01333                                 
Name
(RefSeq) hypothetical protein
  KO
K11807  WD and tetratricopeptide repeats protein 1
Organism
pif  Phytophthora infestans
Brite
KEGG Orthology (KO) [BR:pif00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pif04121]
    PITG_07852
Ubiquitin system [BR:pif04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     PITG_07852
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd EIF3I ANAPC4_WD40 WDR55 Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st TPR_CcmH_CycH
Other DBs
NCBI-GeneID: 9465830
NCBI-ProteinID: XP_002904071
UniProt: D0N9Z5
LinkDB
AA seq 692 aa
MEVARSTPPPRARSERYWKYSHYPVGLSRLIQEREVRGNARVIDAACQGHGSLVRRLQCE
AVLDGHGGCVNTLQWNETGKLLASGSDDHNVIIWSYDQHKKQQVIESGHTLNIFAVCFVP
GTDDHVLASGAMDNDVRIHYAPFRKDSSKLFRVHRDRVKDIGSSWAVPKVFWTVAEDGLV
YQFDLRALPRTSGRCESPDTSGVLINLGRDRNGRVLRGMGMTAHPLDPTKIVFACGDFYT
RMYDRRMLRVQQHISSARSAGATSPVEVFAPPHLHLDAYCDSKAQRFHDKSHGTSIRFSS
DGSEILANYHNDHIYLFRVGSNETVVFNRDNKTEPQIQPLAWLNGAHMDEPSLPLDLHME
GVGILHEQGQDALGRSEYTRALKSLTLACGARGVAELTMTQRKELHHDCAKAYLGRSWNA
DSYLAAVQCKKALELDPNDREVELTYIKALGAGKRQRQAKWQARRYKEKYPDHEIDVTSF
LNETASTDRGDRTVDRSLRLYRSSDEDDSSDSEEEVPHSNQDNNAGEELPDDDDGFWEGD
LVNSTPVNCDVLRRYIGYCNVQTDIKEAAFFGKNDAYIIAGSDDGRALVWDKATGELVNA
IEADADIVNCVQPHPFDACLATSGIENVIRLWSPTSGEENTPTDAELEEIVLKNQSQMDD
IAISFEGAMHNMVRLVFQAGGDHQAIQECATS
NT seq 2079 nt   +upstreamnt  +downstreamnt
atggaggtcgctcgatctacgccgcccccgcgtgcgcgctctgagcgctactggaagtat
agtcactaccccgtgggtctttcccgtctcatacaagagcgtgaggtgcgtggaaacgct
cgtgtcatcgacgccgcctgtcagggccatggcagcttagttcgtcggctccagtgcgag
gccgtactcgacggtcacgggggttgcgtcaacacgcttcagtggaacgaaactggaaag
ctgctggcgtccggatcggacgatcataacgtgatcatatggagctacgaccaacacaag
aagcagcaggtgatcgagtccggccacacgctcaatatcttcgctgtatgcttcgtccca
ggcacagacgatcacgttctagcctctggagctatggacaacgacgtccgcatccactac
gccccattccgtaaagactcgtccaaacttttccgtgttcatcgagatcgagtcaaagat
attggcagctcgtgggcagtgcccaaagtattctggaccgtagctgaggacggactggtg
tatcaattcgatctacgcgctctaccccgaaccagtgggcgatgtgagtcccccgacacg
tctggcgttcttatcaatttaggcagggacaggaacggccgagtgttgagaggaatgggc
atgacggcgcacccgttggacccgacgaaaattgtctttgcttgtggggatttctacacg
agaatgtacgaccgacgcatgctgagagtgcagcagcacatctcgtcggccagaagcgca
ggagcgacgagccccgtggaggttttcgctcctccccatctgcacttggatgcgtattgt
gatagtaaagcgcagagattccacgataaaagtcacggaacgagcatccgattcagcagt
gacgggtctgagatcctcgcgaattaccacaatgaccacatttacctgttcagagtgggg
tcgaacgagacggtggtgttcaatagggacaacaagaccgagcctcagatccaaccgcta
gcgtggctcaatggtgcgcacatggatgaaccgagtctgccgttggacttgcatatggag
ggagtggggatcttgcatgaacaaggccaagatgcacttggcaggagtgagtacacgcga
gcactcaagtcgctgactctggcgtgtggtgctcgtggagtagcagaactgactatgacg
caacgcaaagaactgcatcacgactgtgccaaggcctatctgggacgatcgtggaacgca
gatagctatctggccgcggtgcagtgcaagaaggcgctggagctcgatccaaatgatcgc
gaggttgagttgacgtatattaaggcgctgggtgcagggaaacggcaacgacaagccaag
tggcaggctcgacgatacaaggagaagtaccctgatcacgaaatagacgtgacctcgttc
ctgaacgagacagcgtcgaccgaccgaggtgatcgtacagtagatcgttccttgcgtttg
tatcgatcctcggatgaggatgattcgagtgacagcgaggaggaagttcctcatagcaac
caggacaacaacgctggagaggagttacctgacgacgatgacggcttctgggagggcgat
ttagtgaacagcacaccggtgaactgtgacgtcctccgacgctacattggctattgcaat
gtgcaaacggacattaaagaggccgccttcttcggtaagaacgacgcctacatcatagct
ggaagcgatgatgggcgtgcgttggtctgggataaagctactggagaactggtgaacgct
attgaagcggacgcagatattgtgaattgtgtgcaacctcatccatttgatgcttgtttg
gcaacgagtgggatcgagaatgtgattcggctatggagtcccacgagtggcgaggagaac
acgccgacggacgctgaacttgaggaaatcgtattgaaaaaccaaagccaaatggatgat
atcgccatttcattcgagggtgcgatgcacaacatggttcgtctcgtcttccaggcgggc
ggtgaccaccaggcgatccaagagtgcgccaccagttaa

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