Phytophthora infestans: PITG_08026
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Entry
PITG_08026 CDS
T01333
Name
(RefSeq) DEAD/DEAH box RNA helicase, putative
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
pif
Phytophthora infestans
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pif03041
]
PITG_08026
03009 Ribosome biogenesis [BR:
pif03009
]
PITG_08026
Enzymes [BR:
pif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PITG_08026
Spliceosome [BR:
pif03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
PITG_08026
Ribosome biogenesis [BR:
pif03009
]
Eukaryotic type
Pre-60S particles
Helicases
PITG_08026
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
YmjE
Motif
Other DBs
NCBI-GeneID:
9472647
NCBI-ProteinID:
XP_002904219
UniProt:
D0N9A9
LinkDB
All DBs
AA seq
758 aa
AA seq
DB search
MAKKQKEQQEDEDLVMTIASDEELSNAEESSDEENSEDEAATQQQQEQINEDFEFDEGGA
FHSSGGSSWDFTAAISRIEKMESGIPTATKRTKKDQQSREELVDELEKKKAAEFFEADPF
AAQEFAKTKFETFADLKLSRPIMRAISHIGFEKPTPIQQRAIPIALTGKDICASAQTGSG
KTAAFLLPILERLQFRSRRVQSTRVMIICPVRELATQCQSMLEQLARFTDITCSLAVGGL
PLKAQEAELRNRPDVVVCTPGRMIDHLRNSKSVHMDDLEILVLDEADRLLELGFTEEVLE
LVRMCPVQRQTMLFSATMTSKVDQLIDLSMKRPVRISTDPLFDMAKHLVQEFVRIRPNRE
DDREAILLALCTRTFRSNTIVFMETKSHAHRMMIIFGLAGIKAAELHGNLQQRERLEALQ
KFRDGTVDVLLCTDIAARGIDVRGVHAVINYEMPKDITTYVHRVGRTARAGRNGRAVTLT
SESRRLVMKQVSRHCQGFVKSRAVPDPVIAQWKARIESMLEDVKLVMHEETLEKRMREAE
KEATRATNLLKHRDEINARPARTWFMSEKEKKNVNERAEEDRRAKEEAAKEEAESADTMS
RAKKLKLMSHKKRRLFEIREREERMLADAERDDEEDTGKKGKKGAVFTSMHVAGAAKRAK
KAQQDTTRSREEESIAEMHERKRLKREKARAARSSHKSGAFDVDMTNDGTAVPKSRKQRD
ANAGHSPFEFKEKITDYKKHAKKSSSSFKSKAKYKRRK
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaaacagaaggagcagcaggaggatgaggacctggtaatgactatcgcgtcc
gacgaggagctttctaatgccgaggagagctcagatgaggagaattcggaggatgaagcc
gccacgcaacaacagcaggagcaaattaacgaggactttgagttcgatgaaggtggcgcc
ttccactcgtcaggcggcagctcgtgggactttacagccgctatctcccgtattgagaag
atggagagtggcatccctacagccactaagcgtaccaagaaggaccaacagagtcgcgag
gagctggtggacgagctggagaagaagaaagcggccgagttcttcgaagccgatcctttc
gctgcccaggagtttgctaagacgaaatttgagacgttcgccgacttgaagctctcgcgt
ccgatcatgcgcgccatttcccacatcggtttcgagaagccgacaccgattcaacagcgt
gcgatccctatcgctctcactggcaaggatatctgtgctagtgcgcagacgggtagcggt
aagaccgccgccttcctgttgcccattctggagcgtctgcaattccgctcgcgacgtgtc
cagtccactcgagtgatgatcatctgtcctgtgcgtgaactggcgactcaatgtcagtcg
atgctcgagcaactagctcgtttcacggatatcacgtgctcgctggctgtcggcggattg
cctcttaaagctcaagaagcagagctgcgtaaccgtccagacgttgtggtgtgtactcct
ggtcgtatgattgaccaccttcgtaactccaagagtgttcacatggatgatctcgaaatc
ttggtgctggatgaagctgatcgtctgcttgaattgggtttcactgaagaagtactggag
ctggtccgtatgtgtcctgtacagcgtcagacaatgttgttctccgctacgatgacgtcc
aaggtcgaccaattgattgacttgtcgatgaagcgtcctgtgcgtatcagtaccgacccg
ctcttcgatatggccaagcacttggtacaggagttcgtgcgtatccgtccgaatcgagaa
gatgatcgtgaagcaattctcctggctttgtgcacgcgtacgttccgctcgaacacgatt
gtgttcatggagaccaagtcccatgcgcatcgtatgatgatcattttcggtcttgctggt
atcaaggcggctgagcttcacggtaacttgcagcagagagagcgtctggaggcgctccag
aagttccgtgatggcacggtggacgttcttttgtgtacggacattgctgcacgtggtatc
gatgtacgtggtgttcacgctgtcattaactacgaaatgcccaaggatatcaccacgtac
gtgcatcgtgtgggtcgtacagctcgtgctggacgcaacggtcgtgccgtcacgctcacg
agcgagtctcgtcgtctggtgatgaagcaggtgtcgcgtcactgccagggcttcgtcaag
tctcgtgctgtgcctgatcccgttatcgcgcaatggaaagctcgcattgagagcatgctg
gaggacgtgaaactggtgatgcacgaagaaacactggagaaacgtatgcgtgaagctgag
aaggaagcgactcgcgcgacgaacctgctgaagcatcgcgacgagatcaacgcgcgacct
gcgcgtacgtggttcatgtcggagaaggagaagaagaatgtgaacgaacgtgctgaagag
gaccgtcgtgctaaggaggaggctgcaaaggaagaagcggagagtgcagacaccatgtcg
cgcgctaagaagcttaaacttatgagtcacaagaagcgacgactgtttgagatccgtgag
cgtgaagagcggatgcttgcggatgctgagcgggatgatgaagaagacactggcaagaag
ggcaagaagggcgctgtatttacgtccatgcacgttgctggagctgccaaacgcgctaag
aaagctcaacaggacactacacgatcacgtgaagaggaatccatcgcagagatgcacgag
cgcaagcgtctcaagcgcgaaaaggctcgcgctgcacgcagcagtcacaaatctggtgcg
ttcgacgtcgacatgactaacgatggcacggcggtcccaaagtccaggaagcagcgcgat
gcgaacgcaggacacagcccgttcgagtttaaggagaagatcacggactacaagaaacac
gccaagaagagctccagctccttcaagtccaaggccaaatacaagcggcgcaaatag
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