Phytophthora infestans: PITG_08087
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Entry
PITG_08087 CDS
T01333
Name
(RefSeq) RNA polymerase II-associated protein 1, putative
KO
K20826
RNA polymerase II-associated protein 1
Organism
pif
Phytophthora infestans
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pif03021
]
PITG_08087
Transcription machinery [BR:
pif03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
PITG_08087
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
fvmYukDl_N
Motif
Other DBs
NCBI-GeneID:
9472774
NCBI-ProteinID:
XP_002904265
UniProt:
D0N9F5
LinkDB
All DBs
AA seq
1116 aa
AA seq
DB search
MSAQQSGDGVDMDAELAQLLLEQEQFLNQKKQPSAKVSRREGPPKVSSSKTSEKASESAP
DEGPQVLKGVVERQVKPAGQQSFVFAPNPSGFPAVNCRGPGQSLFGRRRREAKAKEQEQQ
QETPFDHESRDIDAANRAKLQEMSSQEIMEAQQELLRTLDPELVEKLKNRKKKEKKMGRN
SVQTVNKVAIGQSIRKRDEEDEQLQKEEMIKSLAAVKTEQELKEQAKLLSVEERAKLDWT
QTSKKSEKPATGHSKKIARPVAEDATLERFDLDGKSLQKTDAELPVHSGLFHHGDDPEAA
GYTVPELLHLARSSVASQRAMALNVVAKILHNRQLQERAGLLVTPRVLPRDLAMTLRIVL
DDQNYTALSAAVSALHAFVVPVDDDEEFVSELKYGTVVLPPTVHLHRNDVTKSKSHSNEV
NEVVYIDTTEADDGTSISDDELAALDPVQALVSMDLATRLRYILESIQLPDQDATEKMLD
ILRAVARHSPRAAHDMSSNARLLKLLQQQYIESEQVLTFQEGNTRSLQLSLKALQLVRVL
CQGQRSVASALIASGLIQSTKGFLALKEVSCGDVEGQAAVLFNQMQVESLRIWRVLLGYG
LDFHCFAYLFPALSGFMQDGTDVSTARKAALFAALESFCGLGSVHEAQHYFNQLGFFLDA
AKDEAVRCIAALLKETEDDVETAVLLSTTLRFLSAACAHAVKYTLESSGLVEVFKLLQSS
REVLPRLSDTATKRDLLLSIAGFHRQVVANGLLPDDMDDVEVEQTFGRHVKTPLLVAATS
AVSSSSAKLSHSLIQACEFTLVLGELIAAGPSDVVTVDFVQRVYHQALILVERLSGGTEF
LTAQLIAGVLFHHRTLQLLGVFSDEADATRMSRVLIPIYQALVNAPRDQEAHSRQIFTGV
SSVSKFSCHLYLPLEEHTYTPSNLPLPSFWMLAPLSRIEYSTRDENSTDVASTRAHSDEI
KVIVSATCRFVFELERLAPSPASIPSIAELRPEDKLFHLTHVFFAGSDVLFDDHVDAALR
QLLPTLVTSILRSSDLYQGILRNLKRVQILESGNDLEPSQNSFSSDEQQVLTFVEKLVAE
FTASSFGNSHFAQLCATSKWRLLGGLLPTLWPSTTS
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcccagcaaagtggcgatggtgtcgacatggacgccgagttggcgcaacttctg
ctcgagcaggagcagttcttaaaccaaaagaagcagccatcagctaaagtatctcgccgc
gaaggtccacccaaagtttcgtcgtctaaaacctcggaaaaggcctccgaatcggccccg
gatgagggtccgcaggttcttaagggtgtcgtggagcggcaggtgaagcctgcgggtcag
cagagcttcgtattcgcccccaacccttccggcttccccgccgttaattgtcggggtccc
ggtcaaagcctctttggtcgcagacgccgcgaagcgaaggcgaaagagcaggaacagcaa
caggagacacctttcgatcatgagagcagggacatcgatgcagccaacagagccaaacta
caggagatgagctctcaggagatcatggaggcacagcaagagctactgaggacgctggac
ccagagctagtcgagaagctaaagaataggaagaaaaaagagaagaaaatggggaggaac
tctgtccagacagtgaacaaggtcgccattgggcagtcgatacgaaaacgtgacgaggaa
gacgaacagcttcagaaagaggagatgatcaagagtttggctgcagttaagaccgagcaa
gagctcaaagaacaagccaagcttctgtcggtcgaggaacgggccaaactcgactggacg
cagacctccaagaagagcgagaaacctgctaccggtcacagcaagaagatcgctcgtccg
gtggccgaagacgcgacgttggaacggtttgacttggacgggaagagcctccaaaagacg
gacgcggagttgcccgtgcactcgggacttttccaccacggcgacgacccagaagctgca
ggttatacagtgccagagctgttgcatctcgctcgcagctctgtggccagtcagcgtgcg
atggctctcaacgtcgtggcaaagatattgcacaaccgacagctacaggagcgcgcaggt
cttcttgtgacgcctcgagtgctgcctcgtgacctggcgatgacgcttcggattgtactg
gacgatcagaactacacggcgttgagcgctgctgtgtctgcgctacacgcgtttgttgtg
cctgtggacgacgatgaagagtttgtatccgagctcaagtacggtactgtcgtgcttccc
cccacagtacacttgcaccgtaatgacgtcacaaagagcaaaagtcactcaaacgaggta
aacgaagtggtctacatcgacaccactgaagccgacgatggaactagcatcagtgacgac
gaattggcggccttggacccggtgcaggcacttgtgagcatggatctggccacacgactg
cggtacatcctcgagagcatccagctaccggaccaagacgccaccgaaaagatgctggac
attttacgtgctgtggctcgtcactctccacgcgcagctcacgacatgagctcgaacgcg
aggctcctcaagctactgcaacagcaatatatcgagagcgagcaggtgttaacattccaa
gaaggcaacacccgatcgctccagctgtcactgaaagccctgcaacttgtgcgcgtgctc
tgtcaaggccagcgcagtgtggcgtctgcgctcattgccagtggcttgatccagagcaca
aagggcttcttggcactgaaagaagtctcttgtggtgacgtggaggggcaagcggcggtg
ttatttaaccagatgcaagtggagagtcttcggatctggcgtgttctgctcggctatgga
ctggacttccactgcttcgcgtatcttttccccgctctctcgggctttatgcaggacggc
acggatgtctcgacggcacggaaggcggcgctgtttgctgcgttggaaagcttctgtgga
ctcggatctgtgcatgaggcgcagcactatttcaaccaattgggcttcttcctggatgcc
gccaaggatgaggcggtgcgctgcattgctgcgttgctgaaggagacagaagatgatgtt
gagactgcggtgcttctctccacgacgctgagattcctctctgctgcttgtgctcatgct
gttaagtacactctggagtcttctggcctggtcgaagtcttcaagttgttgcagtcaagc
cgagaagtgctccctcgacttagtgacaccgcaacgaaacgtgatctgctgttatcgatc
gccggattccaccgccaagtcgtcgccaacgggctcctacctgatgacatggacgacgtg
gaagtggagcagacttttgggcgtcacgtgaagacgcctctgctcgtcgctgccacgtcc
gcagtgtcatcgtcttccgccaagctcagccactctttgatccaagcctgcgagttcact
cttgtgttaggagagctcattgctgcggggccgagtgacgtcgtcaccgtcgacttcgtg
cagcgtgtctatcatcaagccttgatcctcgtcgagcgtctcagtggcggcacagagttc
ttaacagctcagctaatcgccggcgtgttgttccatcaccgcacactgcagctcctcggt
gtgttcagcgacgaagcggacgccacgcgcatgagtcgcgtgttgattcctatctatcag
gctctcgtgaacgcccctcgtgaccaggaagcgcactcgcggcagatcttcacgggcgtc
tcaagtgtcagcaagttctcgtgccacttgtatctccctctagaagaacacacatacacg
cccagtaatctaccactgcccagtttctggatgctcgctccgctctcacgtatcgagtac
agcactagagacgagaactcgacggatgtggcctccacacgagcgcacagtgacgagatc
aaggtgatcgtgagcgccacgtgtcgctttgtgttcgagttggagcgcctggctccttcg
ccggcttcgatcccgtctattgccgagttgagaccggaagacaaactgttccacctgacg
cacgtcttcttcgcgggtagcgacgtgctgtttgacgaccacgtggacgctgcgctgcgt
cagctgcttcctacgctcgtgacgtccattctgcgctcgtcagacttgtaccagggcatt
ctacggaatctgaaacgtgtccagattctagaatctggaaatgatttagaaccgtcacag
aattcgttctcgtcagatgagcaacaagtgctgacgttcgtggagaaactggtggcggaa
ttcacagcttcgtcctttgggaactcgcactttgcacagctgtgtgcaacaagcaagtgg
cgcctgctcggggggcttttgcctactctgtggccatccaccacgtcgtaa
DBGET
integrated database retrieval system
