Phytophthora infestans: PITG_08886
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Entry
PITG_08886 CDS
T01333
Name
(RefSeq) DEAD/DEAH box RNA helicase, putative
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
pif
Phytophthora infestans
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pif03400
]
PITG_08886
Enzymes [BR:
pif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PITG_08886
DNA repair and recombination proteins [BR:
pif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PITG_08886
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
DEXQc_Suv3
AAA_19
T2SSE
nSTAND3
Motif
Other DBs
NCBI-GeneID:
9462154
NCBI-ProteinID:
XP_002902939
UniProt:
D0NDF2
LinkDB
All DBs
AA seq
2164 aa
AA seq
DB search
MTSFLSALRAEFPAPSSTASFASQKATISDSPRVSPPSTAKVTARTFRDPFLSSDKLWEI
STPTHHRDLLKVLQVDHDSLRAANEREAAVGAVDAVVTSKRNKTKDQKPKAKKDVTELLL
AACAQHTAANSESCFFTTLELAESVLQTVQDSPEADTVQAQLFGLVGVEGMELIAFAVQN
QKELSSASVTKQKLQDTQKLLEMADKYEGGGARLTGFSIQTEAEQQFQRQQRKARRRANR
QNGDDDEEVNWLEAAGYDPEVLRLQRELAEEERRLQSSSLVQREFGALQGGYDSTAAAGQ
LASAGALTLPSNTKRTHYKGYEHVFIPAHAKKALGREEKLVSISSLEDFAQTAFHGITEL
NRLQSKLFNAAYTSNQNLLVCAPTGAGKTNVAMLTILQEVKTQLSRESSHGVANMKIIYV
APMKALAQEVVTKFGQRLKALKLKVRELTGDMQLTKKEIEETHVIVTTPEKWDVITRKSS
TQQSLLSQVKLLIIDEVHLLADERGPVIETIVARTLRRVESTQSMIRIVGLSATLPNYVD
VASFLRVYVPSGDSRMQNAATNGGKGGLFFFDATYRPVPLDQTFIGVSTNASLKEALGLS
AAELSTVTASEEDLAKEKKAVGATMSKQRQIQLMMNKLTLAHCLKQVQHSEQVMVFVHSR
KETAATMHSIVELARGNEEEPGTLEAFLPPSELQMPLNLQERVQKSRNKELKELLGYGLG
IHHAGMLRSDRNLTEQLFELGYIRVLCCTATLAWGVNLPAHSVLIKGTQVYNADKGGMTQ
LSMLDVMQIFGRAGRPQYDTSGDAVLVTTQEQLPHYLRLLTTGIPMESALIKALPDHLNA
EIVSGTVSNLEEACTWLSYTYLYVRMRKNPLAYGMKLDDVNEDPMLVARRRQLLMDAAEK
LAACRMIKILREKVRLDSDQEGKIAFAVTSMGRVASHFYIQHTSIETFNDLLDSKAGQKE
GDEDDLDWEKALLVLCSSNEFEQLKSREEEMPELEKLKRRFGRFDVLGGGMDTYTGKTNI
LLQSLIGRARVSSFTLISDTNYVAQNGSRVCRALFEICLKKNSARKADKFLQLAKCIDQK
MWFDQNAMLQLPNVPLDVVGEVDRRHHMSLYDAVVDPDAFNLSPKIQKWVQSVPFIDIDH
VQTQPFGGNMIKLTFELCPLFLEWKEGVFQGKSLASWLWVEDAVTGYIYHSEYSVLHQSR
FLGWKAGTQSLEIECYLPVFISPTQTEANYVIRIISDRFVGIESYYEVSYKPSARPVADR
KEEMYTKLLRLHPQPLQSLDDPVYQALYVGKFQYFNPIQTQAFHQLYHQNGNVLLCAPTG
SGKTVCAELAMLRVWKQLQESSQGSARRTCQSLIVYIAPMKALAREKVAEWKTRFENNPQ
LRKKVVEVTGDTLVNVDFILTKADIVVTTPEKWDLLTRSSSIGRALMTQMALVVVDEVHL
VGEAPRGAVLEVLISRLRRFQRSGPPIRVIGLSTALANAGDVGRWLGGITSSHAKNPDVG
QVYNFRASVRPVPMDVHIQGFPERHYVARMAAMNKPTFMAIKTHSPDKPVLVFVSSKAQT
KLTALDLIQFCVADDGDKRFLKMDEAVMDSICQSSQIGDETLKHTLSFGIGLHHAGLARR
DRALVEKLYRDRLIQVVISTSTLAWGVNLPAHLVVVKGTEYFQNGRYRSYPLSDLLQMIG
RAGRPLLDDKGVACVLVEESKKNMTQRFLYEPLAVESCLGGNAVLANHLNAEIAAGLVRS
TRDVMDYLSWSLLFQRVLKNPSFYGVGTEVVAAATSKQAKTACPSTQDALETFFQQLIST
TMEQLEACQCVAASRTDGASSFEPTFAGKLAASLYVDVRTVSNMLTALTTVSTERRTTDD
TLLLLCVICESSVELRDVPLRHNEVMSNLIADLCGKVKYSPLQHLFASAPKRRKALLETH
GSEVKALLVLQMHLTGMRLPSSDFVNDLRTVLDHLPRLLSAAIDLCAHLKLADLVLAGIR
LSQAVVQGRWPNESQELRQLPHASQAAVKLLKEQFDISDIAELQAALAVKSKKTQIVARL
QSLPSQRGGLTKHKINEFARVAEEVPRLCVEVQKRELQLEVQLTGLNDQGTRNLAFTSRL
QKPKPYGFYVLLTKKEGELVHVKHVAWKHKVKVSLSLPTTGIEYEVHVLSDAIAGIDSSH
VVKA
NT seq
6495 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgttcctgtcggcccttcgcgccgaattccctgccccctcctcgacagccagc
tttgccagtcaaaaagcaacaatttccgattctccgcgagtgtcaccgccctctactgcc
aaagttacagccagaacattcagagatcccttcctgtcgtcggacaaactgtgggaaatc
tcgactcctacacatcatcgcgacctgctaaaagtcctgcaagtagaccatgattctctg
cgtgcagctaacgagcgcgaggccgcagtgggcgctgtagatgccgtggtgacctccaaa
aggaacaagacaaaggaccagaaacctaaagccaaaaaggacgtgacagagctgctgctt
gctgcgtgtgctcaacacacagcagccaatagcgagagctgtttctttaccacattggaa
ctggccgagtctgtgctacagactgtgcaggacagtcctgaagcagacactgtccaggcc
caactcttcggtcttgtgggcgtggaaggcatggagctcatcgcattcgcagtgcagaac
caaaaagaattaagcagcgccagtgtgaccaaacagaagctgcaggacacacagaaactg
ctggagatggccgataagtacgagggtggaggggcacgcttaacagggttcagtatccag
acagaagctgagcaacaattccaacgtcaacagaggaaagctcgacgtcgagctaatcga
cagaatggagacgacgacgaagaagtcaactggctcgaggctgcaggatacgatccagaa
gttctgagactgcagagagagttggcagaggaagagaggagactccagtcctcgtccctc
gtacagcgcgagtttggagctctgcagggaggatacgactccaccgctgcggctggtcaa
ctggcgtcggcgggggcgcttactctgccgtcgaacaccaagagaacgcactacaaaggc
tacgagcacgtgttcatccctgcgcacgctaaaaaagctctaggcagagaagagaaactc
gtgtcgatatcaagtctcgaagactttgcacagacggcgtttcacgggatcacggagctc
aatcggctgcagtccaagctctttaacgcggcgtacacgtccaatcagaacctgctggtg
tgtgcccccactggagccggtaaaaccaacgtggcgatgctcacgatcctccaggaagtc
aagacccagctcagccgtgagtccagtcacggtgtagccaacatgaagatcatctacgtg
gctcctatgaaggctctggcacaagaagtggtgaccaaatttggacaaagactgaaggct
ctgaagctgaaagtacgcgagctgacaggcgacatgcagctcacgaagaaggagatcgaa
gagacccacgtgatcgtgacgacacccgagaagtgggacgtcatcacccgcaagtccagc
acgcagcagtcgctgctgagtcaagtgaagctgctgattatcgacgaagttcacttactc
gcggacgagcgaggccccgtcatcgagacgattgtggcacgcacactccgtcgagtggag
agcacgcagagcatgatccgcatcgtcggtctgtcggctacgctgcccaactacgtggac
gtggcgtcgttccttcgcgtgtacgtccccagtggcgattctcggatgcagaacgcagct
acgaacggcgggaaaggaggtttgttcttctttgacgcgacgtatcgacctgttccgctg
gatcaaacgttcattggggtgagtactaatgccagtctgaaggaggcgctggggttgagt
gcagcggagctgtctaccgtcacagccagtgaggaggatttggcgaaggagaagaaagca
gtaggcgcgacgatgagtaaacaacggcagatccagttgatgatgaacaaactcacgttg
gcgcattgtttaaaacaagtgcagcatagcgaacaggtgatggtgtttgtccactcccgg
aaagaaacagcagccacgatgcacagtatcgtcgagctggcgcgtgggaacgaggaagag
ccggggacgctggaggcttttctgcctccttctgagctccagatgcccctcaatctacag
gaacgggtgcaaaagagtcgcaacaaagagctcaaagagcttttaggatacggattgggg
atccaccacgccggtatgctgcgaagcgatcggaacttgaccgagcagctctttgaactt
ggctacatccgtgtcttgtgctgtacggcgacgttggcgtggggtgtgaacttgccagcg
cactcggtccttattaagggtacacaggtgtacaacgccgataaaggaggcatgacgcag
ctgagtatgctggatgtgatgcagatcttcggtcgtgctggacgtccgcagtacgatacc
agtggcgacgctgtgctggtgacaacgcaagagcaacttcctcactatctccgcttactc
accaccggtataccgatggaatccgcgctgatcaaggctcttccggaccatctcaacgcc
gagattgtatctggaacagtgagcaatctggaagaggcctgcacgtggctcagctacacg
tacttgtacgtgcgcatgcggaagaatccactggcgtacggtatgaagctggacgacgtg
aacgaagacccgatgcttgtggcaagacgcagacagctcctcatggacgcagccgagaaa
ctggcggcgtgtcggatgatcaagattctacgcgagaaggtgcggctggattccgaccag
gaaggcaaaatcgcgttcgccgtgacgtccatgggccgagtggcaagtcatttctacatc
caacacacgtcgatcgagacgttcaacgatctcctggacagtaaagcaggacagaaagaa
ggggacgaggacgatctggactgggagaaggcgctcctggtgctgtgcagtagcaacgag
ttcgaacagctcaagtcgagggaagaagagatgccggagctagagaaactcaagcgcaga
ttcggccgcttcgacgtgctgggcggcggcatggacacgtacacgggcaagacgaacatc
ctgctgcagagtctcatcggccgcgcgcgcgtgtcgtcgtttacgctcatctccgacacg
aactacgtggcgcagaatggctctcgagtgtgtcgcgccttgtttgagatttgcctgaag
aagaatagcgctcgaaaggccgacaagtttctgcaattggccaaatgtatcgaccagaag
atgtggttcgaccagaacgcgatgctgcagctgcccaatgtgccgctagatgtcgtcgga
gaagtggatcgtcgacatcacatgagtttgtacgacgcggtggtggatcccgacgccttt
aatctgagtccgaagatacagaaatgggtacagagcgtcccgttcatcgacattgaccac
gtccagacgcagccgtttggtggcaatatgattaaactcacgttcgagctgtgtccgctg
ttcctcgagtggaaagaaggcgttttccagggtaaatcgctggcgtcgtggctgtgggtg
gaagacgcggtcaccggctacatctaccactccgagtactcggtcctgcatcagagtcgc
ttcttgggatggaaagcaggcacgcagagtctcgagatcgagtgctacttgcctgttttt
atctctcccacgcagacggaggccaactatgtgattcgtatcatctcggaccgctttgtg
ggcatcgaatcctactacgaagtgagctacaagcccagtgcgcgccccgtggctgacagg
aaggaggaaatgtacacgaagctgcttcgtctgcatcctcagcctctgcagtcgctggat
gatccggtgtaccaggcgctgtatgtgggcaagttccagtactttaacccgatccagacg
caagctttccaccagctttaccaccaaaacgggaatgtgctgctctgcgctcccactggt
agtgggaaaacggtgtgtgccgagttggccatgttgagagtgtggaagcagctgcaggag
agcagtcaaggctctgcacgacgcacttgtcagtcgctgatcgtgtacattgcgccgatg
aaggctctagctcgagagaaggtggcggagtggaaaacccgcttcgagaacaacccgcag
ctgcgtaaaaaggtggtggaagtgacgggggatacgctggtcaacgtggattttatcctg
accaaggcggatattgtggtgacaacgccggagaaatgggatctgctaacacgaagcagc
tccatcggtcgagcgttgatgactcagatggcgcttgtggtcgtagacgaggtccattta
gtgggcgaggcgcctcgtggagctgtgctggaagttttaatcagtcgactgagacgattc
cagcgctcggggcctccgatccgcgtcattggactctcgacagccctcgccaacgcggga
gacgtgggtcgatggctgggagggatcacgtcgagtcacgcgaaaaacccggacgtcgga
caggtgtacaacttccgagcgtcggtgcgtcctgtgcccatggatgtgcatatccagggc
ttcccggagcggcactacgtggctcgtatggctgcaatgaacaagcccacgttcatggct
atcaagacgcattcccccgacaaaccggtgctggtcttcgtgtcgtccaaggcgcagacg
aagctgacggcgctggatttgatccagttttgcgtcgcggacgacggcgacaagcgcttt
ctgaagatggacgaggccgtgatggactcgatctgccagtcgagccagattggggacgag
acgctgaagcacacgctgtcgtttggcatcggtctgcaccacgctggcctggcgcggaga
gaccgagcgctggtggagaaactgtaccgagatcgactcatccaagtggtcatctccacg
tccacgttagcgtggggcgtgaatctcccggcgcatcttgtggtggtgaaaggcaccgag
tacttccagaacggccgctaccgctcgtacccgttgagtgatttactgcagatgatcgga
cgtgctgggcgtccgctgctggatgacaagggcgtcgcctgtgtgttggtggaagagagc
aagaagaacatgacgcagcgcttcctgtacgagcctctggcggtggagtcgtgtctcgga
ggcaacgcagtgctggcgaaccatctgaacgccgagattgcggccggattggtccgatcc
acaagggacgtgatggattatctgagctggagcttgttgttccagcgcgtgctcaagaac
ccaagcttctacggcgtcggcacggaagtggtggcagcagccacgtcgaaacaggccaag
acggcctgtcccagtacgcaagacgcgttggagacgttcttccagcagctcatctcgact
acaatggagcagctcgaggcttgtcagtgcgttgcagcgtcacggacagacggcgcgtca
tcgttcgagccaacgtttgctggcaagctggctgcgtcgctgtatgtggacgttcggacc
gtgtccaacatgctcacagcgctcacgacggtgtcaaccgagaggaggacgacggacgac
acgttgctgctgctgtgtgtgatctgcgagtcgagtgtggagctacgcgacgtcccactg
cggcacaacgaggtcatgagtaacctcatagcagatctctgcggcaaggtcaagtactcg
ccactccagcacttgtttgccagcgctccgaagcgtcggaaggcgctattggagacgcat
gggagtgaagtgaaggcgcttctcgtcctgcaaatgcacttgacggggatgcgtctgccc
tccagtgactttgtcaacgacctgcgcactgtattggaccatctcccgcgtctgctgagc
gctgcgatcgacctctgcgcgcacttgaagctcgcggatctcgtgctagcaggcatccgc
ctgtctcaagctgtggtccagggacgatggccgaacgagagccaagagctgcgtcaactg
ccacacgcgtcgcaagcggctgtgaagcttttgaaggagcagttcgacatctcggacatc
gctgagctacaagcagcgctagcggtcaagagcaagaagacgcagatcgtggcacggctg
cagagtcttccgagtcaacgtggaggtctaacgaagcacaagatcaacgagtttgctcgt
gtggcggaagaagtgccacgtctttgtgtggaggttcagaagagggagctacagcttgag
gtgcagctgacgggcttgaacgaccaaggaacgaggaatctggccttcacgtcgaggctg
cagaaacccaaaccgtacggcttctacgtgctcttgacgaagaaagaaggagagctggtg
catgtgaagcacgtggcgtggaaacacaaggtgaaagtgtcgctctcgttgccgacgact
ggtatcgagtacgaggtgcacgttctgtcggatgcaattgctgggatcgacagctcgcat
gtcgtcaaggcctaa
DBGET
integrated database retrieval system
