Phytophthora infestans: PITG_09437
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Entry
PITG_09437 CDS
T01333
Name
(RefSeq) hypothetical protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
pif
Phytophthora infestans
Pathway
pif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PITG_09437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pif03019
]
PITG_09437
Messenger RNA biogenesis [BR:
pif03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PITG_09437
mRNA degradation factors
5'-3' decay
Lsm complex
PITG_09437
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
9462558
NCBI-ProteinID:
XP_002903090
UniProt:
D0NC00
LinkDB
All DBs
AA seq
102 aa
AA seq
DB search
MVLRDGRHLVGYLRSFDQYSNIILEDTYERHVAGGLFCDIELGLNIIRGDNIVLLGELDS
DKERDQPHMKRVELEEVLEAEERLNEEGNTSVRQQWDFEQQH
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atggttttgcgggacggccgacatctcgtcggatacctgcggagttttgaccaatactcg
aatatcattctagaagacacatatgagcgccacgtggctggaggactgttctgcgatatt
gaactgggtcttaacattatccgtggcgacaacatcgttcttctcggcgaactggacagc
gacaaggagcgcgaccagccacacatgaagcgcgtggagctggaggaggtgctagaggcc
gaggagcggctgaacgaggaaggcaacacaagtgtgcgtcagcagtgggacttcgagcag
cagcactaa
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