Phytophthora infestans: PITG_09477
Help
Entry
PITG_09477 CDS
T01333
Name
(RefSeq) ATP-binding Cassette (ABC) Superfamily
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
pif
Phytophthora infestans
Pathway
pif02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PITG_09477
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pif02000
]
PITG_09477
Transporters [BR:
pif02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
PITG_09477
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
MukB
AAA_23
AAA_29
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
9462596
NCBI-ProteinID:
XP_002903127
UniProt:
D0NC37
LinkDB
All DBs
AA seq
1806 aa
AA seq
DB search
MADAGSSDDAESATLTALSDCVTTVLENDIAYGLCVTNSGLFDLLPDNFQDRNSSSFSSA
GSSDDDDDFSGDSVCRIMCSEQTSSASASCCAAAASLRACNTSSQAVTTCKQLFDDVFTY
QNECDGGISSANTILITVVAIVAVAVAAIAIFARCYKQIKSNFAAKVAATWAQVTNLVWK
NMILRRRRPVSLLMELFLPVLLSTALLLLANLDNFADGWRSQWFTSEAAQLDANSTLICS
DLVVWGLEAIGGPSSTMTSFYTGGQSVLGLFFLVSYIKFVSTTTTTMVMEKENRLREVMK
IMGLSDATLLLSWCLTTAVLATPLAFTIAAVLKYGNVFPTAEYATLVFLFWALSVAITAF
AYFVAPFFNKSRTAAIASVLLWLILFFPYFAVQSADTNAPRYWAALSPPTAFALAVDELL
RRAQLGTGFAYSVGLREEPITVPSAFRMSLFLLLDSVILVALGWYLEQVLPQQFGVRKPW
HFLLTKSYWVDKMGQSEDDEMATCSENYATPILSPQAGGVYTQLTDQNVAKPSVNAYVEP
VNATLAMQERNGTCLQIRGLRKVFPSEEDGEERVAVAGLDLAMYSGQITALLGHNGAGKT
TIISMLTGLIPPSAGDATLYGCSIRRDFHDLRRVIGICPQHDVLFQDLTVEEHLLLFGTM
KQIPRKQLQLNVDKMIESVGLTEIRHALAKTLSGGQKRKLSVALAFLGGSKLVFLDEPTS
GMDPYSRRFTWNLLQQSREDRVIVLTTHFMDEADILGDRIAILADGQLRCAGSSLFLKNR
FGAGYNLTLIKTADGSCDPQQVELFLKRFVPGVKCLSSSGSELAFQLPAASSDAFPSMLE
QLDAETSTLGVQQYGISVTTLEEVFLRISQDHEEEEAEQRKPKAVSPVNVQATAPPITEP
SMWTQYWALTRKRFQIAKRDKKTLAYSVGIPLVFLIILAVLPEIQVADFVPNYASNLPTE
TQQSQCAASSNLSSLIDPNFNVTACVSSRGFDYCTLGVVDCDVSACCNAANVASPWYPCN
TCGSTACFNNNCLEKTNAKLQVTLNGFLVALVVMLAFAFIPAAIVAFVVREKDPIQNAKS
LQLISGANISAYWMASWTHDLLVTIVPIVASAIVIPLSMTPSGADKASASDVFAIIALVV
AHVWAIVPLAYLFSRRYVKHAVAQTALLVFALGTGGLLSIFSFLCRIVNFSLAGSLTLSS
LDRNYLRWVFMIFPGYTLNSGIFELATRKVSRRALFGSGRWTSTSPSFFGLFEGLGKDEC
VECWDRIGPSCCVRQPFDLEIVGAPLLYTLAEALLLSVLVFVLENRSVKWKQTATKSAHS
SVAMETEEEEEEEDDDVQWERHRVEQHEPAPNDLVFIRNLRQQYAGKPRAKVALKDLCLS
IPSGECFGYLGINGAGKSTTMAVLTGQLAPTHGYVTLSGFDLATSSAAARKRMGYCPQFD
ALHDLLTVKEQLELYARIKGIPDAFVDVAVDEQIQALGLAKYRHKLTQGLSGGNKRKVST
AIALLGRPRVVFLDEPSTGVDPSSRRKMWDVIARVSSSDACVVLTTHSMEECEALCSRVG
ILVSGRLKCLGSVEHLKQKFGRGFTVEITLRASDTDTDELKRVLEQARAFLSAERSLSLR
RGRTSRQSSSSLQVATAEKITKANVQELCTALGASERGSRILTHSGTGWLLGSQLEAQGA
ISVDTLSSWWVSETHGERLQSFFQTNFPGSILAEQQGEHFRFQVPKHRPDSDAVLRPAGI
FRALEQTRAHLNVDEYSVSETALEHIFNNMAAQQDEEKGVAHAFNSTGRTTNNFITLAVW
AIASTD
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgccgggtcctccgacgatgccgaaagcgcgacgctaacggcgctctccgat
tgcgtaacgactgtcctggagaatgacatcgcgtacggcctgtgcgtgaccaattcgggg
ctcttcgacttgctgccggataatttccaggaccgcaactcctcatctttctcctccgcc
ggatcttccgacgatgatgacgatttcagcggggactcggtgtgccgcatcatgtgctcc
gagcaaacgtcatcggcttcagcctcctgctgtgcggctgccgcgtcacttcgagcctgc
aatacttcgtcccaggcagtgacaacttgcaagcagctgtttgacgacgttttcacttac
cagaatgaatgcgacggcggcatctcgtctgccaatacaattctcatcaccgtcgtggca
attgtagcagttgcagttgcagcaatcgcgatttttgcaagatgttacaaacagataaag
agcaacttcgctgcaaaagttgccgccacgtgggcgcaagtgacgaacctggtctggaaa
aacatgatactgcgtcgacggcgccccgtgagcttactcatggagctcttcctgccagtc
ttgctctccacggcgctgctgttgctggcaaacctggacaactttgccgacggctggaga
tcccagtggttcacgtccgaagcggcgcaactcgacgccaactcgacgctcatttgtagc
gacctggtagtctgggggctcgaggcaatcggcggaccgtcgtccaccatgacgtccttc
tacactggcggccagtcggtgctggggctcttcttcctagtcagttatatcaaatttgtg
tccactacaacgacgacgatggtcatggagaaggaaaaccgccttcgagaagtcatgaag
atcatgggcttgtccgacgccactttgctcttgtcttggtgtctaaccaccgccgtactg
gccactccactggcctttaccattgccgccgtgctcaaatacggcaacgtgttccctacc
gccgagtacgcgacgctcgtgttcctcttctgggctctcagtgtagccatcacagcgttc
gcgtactttgtggcgcccttcttcaacaaatcccggacggcggccatcgcgtcggttctt
ctgtggctcatcctcttcttcccctacttcgcggtgcagtccgccgacaccaacgcgcct
cgatactgggccgctctctcgcctcccacagcattcgcgctggctgtcgacgagctccta
cgtcgagctcaacttggcacggggttcgcctactcggtgggtcttcgggaagagcccatc
acagtcccaagcgcgttccggatgagtctcttccttctcctcgactcggtcatccttgtg
gccttgggatggtatctggagcaggttttaccgcagcaattcggcgtgcggaaaccgtgg
cactttttgcttacgaaaagctactgggttgacaagatgggccagtccgaagacgacgag
atggctacatgctccgaaaattacgccacaccaatcctgtcgccgcaagctggcggggtg
tacacgcaactgaccgaccagaatgtagccaaaccgagtgtgaacgcctacgtcgagccg
gtgaatgcaactctagcgatgcaagagcgcaacggcacgtgtctccagatccgaggattg
cgcaaggttttcccttcagaggaagacggcgaggagcgagttgccgttgcaggactcgac
ttggccatgtacagtggccagatcacagctctcttgggccacaacggcgccggcaagacg
acaatcatctcgatgctcacgggtctcatcccgcccagcgcgggagacgccacgttgtac
ggctgctccatcaggcgcgacttccacgaccttcgacgcgtgatcggcatttgcccgcaa
cacgacgtgctgttccaggatctgacagttgaagagcatttgttgctgttcggcacgatg
aagcagataccgcgcaagcaactgcaactcaatgtggacaaaatgatcgaaagcgtagga
ttgaccgagattcgccacgcgctggccaagacgctctcgggcggccagaagcgcaaactc
agtgtcgcgttggccttcctcggcggcagcaaactcgtattcctggacgagccgacgtcg
gggatggacccgtactctcgacggttcacgtggaatctactgcagcagagtcgcgaggac
cgcgtcattgtgttgaccacgcacttcatggatgaagctgacattctgggcgaccgtatc
gccattctggccgacggccaactgcgctgtgctggctcctccttgttcctcaagaatcgc
ttcggtgccgggtacaacttgactctgatcaagacggcggacggctcgtgtgacccacag
caagtggagcttttcctcaagagattcgtccctggagtcaagtgcttgagcagctctggc
tcggagctggcgttccaacttcccgccgcttcttccgacgcgtttccttccatgttggag
cagctggacgcggagacgtccacgcttggagtgcagcagtatggcatctcggtcaccact
ttggaggaggttttcttgcgtatttcccaagaccacgaagaagaagaagcagagcagcgc
aaacccaaagcggtgtcgccagtgaacgtgcaggcaacagcgccaccgatcacggagccg
tcaatgtggacgcagtactgggcgctgacgaggaaacgcttccagatcgccaagcgggac
aagaagacgctggcgtactcggtggggatcccgctcgtcttcttgatcatcttggctgtt
ctaccggagatccaagtggccgatttcgtccccaactacgcgtccaacctgcccacagag
acgcagcaaagtcagtgcgctgcgtccagcaacttgtcgagtctgatagatccgaacttc
aacgtgacggcgtgtgtcagctcccggggcttcgactactgcactctgggagtcgtcgac
tgcgacgtcagcgcgtgctgcaacgccgccaacgtcgcgtctccgtggtatccgtgcaac
acgtgcggctcgactgcgtgtttcaacaacaattgtctggagaagaccaacgccaagctg
caggtgacgctcaacggcttcttagtggcgctagtcgtcatgctcgcctttgccttcatc
ccagcagcgatcgtcgcgttcgtcgtacgagagaaagacccgatccagaacgccaagagt
ctgcagctcatcagcggcgccaacatctcggcctactggatggccagctggacgcacgac
ctgctcgtcacgatcgtccccatcgtcgcgtctgcgatcgtcatcccgctgtccatgacg
ccaagtggcgccgacaaggccagcgccagcgacgtgtttgccattatcgcgctggttgtt
gctcacgtgtgggcgatcgtccctctggcctacctcttctcgagacgctacgtcaaacac
gccgtggcgcagacggccttgctcgtgttcgctttgggcaccggcggcctgctgagcatc
ttctcgttcctctgtcgcatcgtcaacttctcgctcgctggctcgttgacgctctcgtct
ctggatcgcaactacctgcgctgggtcttcatgatcttcccgggctacacactgaacagc
ggcatcttcgagctggccacgcgcaaagtgagtcgtcgagcgctcttcggttccggccgc
tggacgtccacgtctccgtctttcttcgggctcttcgaaggcctgggcaaggacgagtgt
gtcgagtgctgggaccgcatcggcccgtcgtgttgcgtccgacagccgttcgacttggag
atcgtcggggcgccgctactgtacacgctggcggaggcgttgctgctgtctgtgctggtg
tttgtactcgagaatcgctcggttaagtggaagcagacagcgacgaagtctgcgcatagc
tccgtggccatggagacggaggaggaagaggaagaagaggacgacgacgtgcagtgggaa
cgtcatcgagtggagcaacacgagccggcgccgaacgacctcgtgtttatccgcaactta
cgacagcaatacgcgggcaaaccacgggccaaagttgcgctaaaggacttgtgtctgtcg
atcccgagtggcgagtgcttcggctacttgggcatcaacggagctggcaagtcgacgacg
atggctgtgctcacaggccaattggcgcctacgcacggctacgtgacgctgagcggcttc
gacttggccaccagctcggctgcggcgcggaaacgcatgggctactgtccgcagttcgac
gctctccacgacctgctgacggtcaaggagcagctcgagttgtacgctcggatcaaaggc
atccccgacgctttcgtggacgtggcagtggacgagcagatccaggcgctcggactcgcc
aagtatcgacacaaactgacgcaaggactcagcggtggcaacaagcggaaggtgtcgacg
gccattgcgctgctcggacgccctcgtgtcgtgttcctggacgagccgtcgactggtgtg
gacccgagttcgagacgtaagatgtgggacgtcattgcgcgtgtgagctcgtccgacgcg
tgtgtggtgctcacgacgcacagtatggaagagtgcgaggccttgtgctctcgcgtgggg
attctcgtgagtgggcgactcaaatgtctcggcagtgtggagcacctcaagcagaagttc
ggtcgagggttcacagtggagatcacgctacgagcctccgacacggacacggacgagctc
aaacgtgtgctggaacaagctcgagcgttcctgtcagcggagcgaagtctttcactgcga
cgtggtcgaaccagtcgacagagttcgagtagcctccaagtcgccactgcggagaagatc
acgaaggctaacgttcaagagctgtgcactgcgctgggggcttctgaacggggttctcgc
atcctcacccactcgggcactggctggttactcggcagtcaactggaggctcagggggcg
atctccgtcgacactttgagctcgtggtgggtctctgagacccacggcgagagactgcag
agcttcttccagaccaacttcccgggcagtatcctcgcagagcaacaaggcgaacacttt
cggttccaagtgcccaagcatcgtcctgacagcgatgcggtgctgcgtccggctggaatc
ttccgtgcgctggagcaaactcgcgcccatctcaacgtggacgagtacagcgtgagcgaa
actgcgttagagcatattttcaacaacatggcagctcagcaggacgaggagaagggggta
gcacacgcatttaatagtactgggaggacaaccaacaattttattacgttggcggtgtgg
gcaattgcgtccacagactga
DBGET
integrated database retrieval system
