Phytophthora infestans: PITG_09610
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Entry
PITG_09610 CDS
T01333
Name
(RefSeq) U6 snRNA-associated Sm-like protein
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
pif
Phytophthora infestans
Pathway
pif03018
RNA degradation
pif03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PITG_09610
09123 Folding, sorting and degradation
03018 RNA degradation
PITG_09610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pif03019
]
PITG_09610
03041 Spliceosome [BR:
pif03041
]
PITG_09610
Messenger RNA biogenesis [BR:
pif03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PITG_09610
mRNA degradation factors
5'-3' decay
Lsm complex
PITG_09610
Spliceosome [BR:
pif03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
PITG_09610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
GDE_C
Motif
Other DBs
NCBI-GeneID:
9461574
NCBI-ProteinID:
XP_002903233
UniProt:
D0NCE3
LinkDB
All DBs
AA seq
82 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGDTYNGHLVNCDTWMNVNLREVICTSKDGDRFWKMPECY
IRGNTIKYIRVPNEVNSQRQRR
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
atgctgccgctttcgttgctcaagacggcacagggccaccccatgctggtggagctcaag
aatggagatacgtacaatggacacctcgtcaactgtgatacctggatgaacgtcaacctg
cgcgaagtcatctgcacctccaaggacggtgaccgcttctggaagatgcccgagtgctat
attcgaggcaacaccatcaagtacattcgcgtccccaacgaggtaaacagccaacgccaa
cgacgatga
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integrated database retrieval system
