Phytophthora infestans: PITG_10481
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Entry
PITG_10481 CDS
T01333
Name
(RefSeq) hypothetical protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
pif
Phytophthora infestans
Pathway
pif03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PITG_10481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pif03021
]
PITG_10481
03019 Messenger RNA biogenesis [BR:
pif03019
]
PITG_10481
Transcription machinery [BR:
pif03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
PITG_10481
Messenger RNA biogenesis [BR:
pif03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
PITG_10481
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
Dev_Cell_Death
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-CCCH_4
Torus
zf-CCCH_3
DUF3126
Zn_finger_prot
Motif
Other DBs
NCBI-GeneID:
9474244
NCBI-ProteinID:
XP_002902266
UniProt:
D0NFE9
LinkDB
All DBs
AA seq
602 aa
AA seq
DB search
MVLGLLLRDEEERRLSFDFEMLLPEDGDDRMDSGEHRNGAVVGVGGATFGHQAAKKDFKR
GTVVCRHWLRALCMKGDNCEFLHQYDMSKMPECRWGMECQVPECPFRHVPDEERVECAFY
KQGFCSHGSSCRYRHIKLAREECPETADFALQAKVADEENVKRRKAQPVNEFFKIAICKH
WEKMGSCPFGDECHFAHGETELRPFPKGEKEEKEARAGRPGGHQGPAFNGGDRPHQGPPP
GPQLPDDGKMAKYFLLQSASYLNLAHSVHHERWAVPPAVLQQIKMASETSDEVFLFFAVG
PSKHYQGVARLVNGAMSSADASAGEDLAAGVVPYEADGKAEWAGSFGIEWLRICECPWER
LAQFENKQLAVSECPNGQELDAETGHALVRLLFNQPQIQLHYRSVEDESKLPGGAEELAT
RRREAAESLFGAPAGPGFGGPAPRWQPSQPGFVFACTTQTIDECFGRMLFGLAQEHEGLA
QQHVTPGTPLFLLNQSDQHLLGIFEAVSPAIVNMMPGAFCHGPNMPSPFPVQTRFAVMLN
APALPTSDPQIKRVIGDNGVDVGPLSLQATQQLADVFAERSGAAFPPNGPPMGPGGPDHF
RV
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggggctgctactccgcgatgaagaagagcggcgtctgtcgttcgacttcgag
atgctgctgccagaagacggtgacgaccgtatggatagtggagagcaccggaacggcgcc
gtggtgggcgtaggcggcgctacgtttggccaccaagcagccaagaaagatttcaagcgc
ggcaccgtcgtgtgtcgccattggctgcgcgcgctgtgtatgaagggcgacaactgcgag
ttcttgcaccagtacgatatgtccaagatgccagaatgtcgctggggaatggagtgccag
gtgcccgagtgtcctttcagacacgtccccgacgaggagcgcgtcgaatgcgccttctac
aaacagggcttctgctcgcacggctccagttgccgctacagacacatcaagttggccaga
gaggaatgtcccgaaacggcagactttgctctgcaggccaaagtggcagacgaagagaac
gtcaagcgcagaaaagctcagccagtcaacgagttcttcaagatcgcgatctgcaaacat
tgggagaaaatgggttcgtgtcctttcggtgacgagtgccacttcgctcatggagagacg
gagctccggccgtttcctaagggtgaaaaggaggagaaagaggcgagagcaggtcgacct
ggaggccatcaaggacccgcgtttaatggtggagatcgaccgcaccagggcccaccgcca
ggtccacagctgccggatgatggcaagatggccaagtatttcctgctgcagtcggctagc
tacttgaatctggcgcattccgtgcatcatgaacgctgggctgtgcctccggctgtgttg
cagcagattaaaatggcgtcggaaacgtcggatgaggtgtttttattctttgcagttgga
ccaagcaagcattatcagggtgtggcgcgtttagtgaatggtgcgatgtcaagtgctgat
gcatcagctggagaagatctcgctgcaggtgttgtaccctacgaggcggacggtaaagcg
gagtgggctggctcatttggtatcgaatggcttcgtatctgcgaatgtccatgggagcga
ctcgcccagtttgaaaacaagcagctggctgtttcggaatgtccgaatggccaggaactt
gatgctgaaacaggtcacgcattagtgcgcttgttgttcaatcagcctcagattcagctc
cattatcgatccgtggaggacgaatcgaagcttcctggaggcgcagaagagctcgctacg
cgacgacgggaagcggcagagagtttgtttggcgctcctgctggacctggattcggtggg
ccggcgccaaggtggcaaccttcacagccaggattcgtgttcgcatgcaccacacagacg
atcgacgaatgctttggtcgcatgctgtttggacttgcacaggaacacgagggactagca
cagcagcatgtgactcctggcactccgctattcctgcttaatcagtcggaccaacacctg
ttgggcatcttcgaagctgtgtctcctgccatcgtcaatatgatgcctggtgcattttgc
catggaccgaacatgccgtcaccgttccccgttcaaacgcgctttgctgtcatgttaaac
gctccagcactacccacgtcggacccgcagattaagcgagttattggcgacaacggagtg
gatgtcggtccgctctcgctgcaagcgactcagcaattggcagacgtgtttgctgagcgt
agcggtgctgcgttcccgccgaacgggccacctatgggtcctggaggcccggaccatttt
cgtgtgtag
DBGET
integrated database retrieval system
