Phytophthora infestans: PITG_10518
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Entry
PITG_10518 CDS
T01333
Name
(RefSeq) bloom syndrome protein
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
pif
Phytophthora infestans
Pathway
pif03440
Homologous recombination
pif03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PITG_10518
03460 Fanconi anemia pathway
PITG_10518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pif03032
]
PITG_10518
03400 DNA repair and recombination proteins [BR:
pif03400
]
PITG_10518
Enzymes [BR:
pif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PITG_10518
DNA replication proteins [BR:
pif03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
PITG_10518
DNA repair and recombination proteins [BR:
pif03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
PITG_10518
Bloom's syndrome complex (BTR)
PITG_10518
FA (Fanconi anemia) pathway
PITG_10518
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
RecQ_Zn_bind
Helicase_C
RQC
HRDC
Zn_ribbon_GRF
Zn_ribbon_GRF_2
SLATT_fungal
Mnd1
Motif
Other DBs
NCBI-GeneID:
9474357
NCBI-ProteinID:
XP_002902298
UniProt:
D0NFI1
LinkDB
All DBs
AA seq
1022 aa
AA seq
DB search
MDDGADSLFGDVDVDALVANHQRAQQQKRRAVPQMPSLSDESFVSPPSTQTNGSQDTASA
MLAEDLRRSIKQTRENLRKVREECDDASLEGEVPDFMQKRRTELEQELEELSRRYRECKG
TTKASPQSRHVSPVQPPPRPAEMPQVYYNGGESSNKSPTCSCGIPTVEARVQHGENANRL
YYRCNTCGFHSWPCVSSDPSVNSKMQRAKRVLRDVFGHNAFRPSQERTVMEAFSGRDVFV
LMPTGGGKSLCFQLPACIDDGVTIVISPLVSLIQDQVQQLEALDVGVANLKGDQDYATEQ
RPIISELFSNQIRIKMLYVTPEKIASSGMLSNLFKSLEKRGLLARFVIDEAHCISQWGHD
FRKDYLNLGTLRTKFPSVPIMALTATANSQTEADIVKNLKLRNPFITRSSFNRPNLTYDV
RKKTSKFMSEIADFVRKHIDDSGIIYCLSKKDCEQTAEKLIKALGFEHTRKASQISFYHA
GLEAGDRAYRHHEWSKGKIKLICATVAFGMGINKPDVRYVIHHTIPQSVTHYYQEAGRAG
RDGEVANCILYYSFLDLTRRRKLITKDRDNMQHRNVHLQNLRRMTEFCENQVECRRTSLL
EYFGEHFSSEQCHGTCDNCKNKVLGISFEKSDVTEDCVALAEMIKTLQGSGDPTTLVQIA
QVFLGMVVKGREWKQNQFEQLGGFGKGKGRYSRSEVERILYHMILRQYLREVDQTNAKGF
TTTFLSLGINANRLMRGERVRIVCKTKYQSRASASDGAPQESAKTSKKKAPKKSASTKTK
TAVTRKNTKKKKASVKDVVEELSDDDVVEVVARPATTAEYPLIPERISSRRIPEDHAETL
AQILKDWRASVCDSENLMPYHILTTGGIASIANAVPVSNAELLEIDGVGRIRVKKYGAAI
INIVKTYLEKNNLTPSPVQAVRSTNVLDSLEVLDSGVEVIEVPAAPKSSPFFQDKNKRKA
SSTSTRPTATANRIVIDDSLDDIDWGELDADMLNQTSSSAATNSRKRSLDSNSTWTAKKR
SN
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggatgacggcgcagatagtttatttggcgacgtggacgtcgatgcactggttgcgaat
catcaacgtgcccagcaacaaaaacgtcgtgctgtgccgcagatgccatcattatcggac
gagagttttgtatctcctccatctacacagaccaatggatcccaggatacggcgagtgct
atgctggccgaagatctccgcaggtcaattaagcagacacgagaaaatcttcgcaaagtt
cgcgaggagtgtgatgatgcgtcgctcgagggagaggtaccggatttcatgcagaaacgt
cgtacagagctggaacaggaactagaggaactaagcaggcgatacagagagtgcaaagga
acaacgaaggcttctccacagagtcggcatgtgtctcctgtgcagcccccacctcgacct
gcagaaatgcctcaagtctattacaatggaggcgagtcttccaacaaaagcccgacgtgc
tcttgtggtatacccacagtggaagctcgagtgcagcatggagaaaatgcgaaccgactt
tattatcgctgtaacacgtgcggatttcattcctggccttgcgtctcaagcgatccaagt
gtgaactccaaaatgcagcgagccaagagagtacttcgcgacgtatttggccataacgcg
tttcgccctagtcaggagcgcacagtaatggaagctttcagcgggcgtgatgttttcgtg
ctgatgcccactggaggtggcaagagtctttgctttcagctacctgcctgcattgacgac
ggtgtcaccatcgttatttctccgttggtctctctaattcaagatcaagttcagcagctg
gaggcactggacgtgggtgttgcgaatttgaagggtgaccaagactacgctaccgaacaa
cggccaattatttcggaactcttttccaatcagataagaatcaagatgctgtatgtgact
ccagagaagattgcctcaagcggcatgctcagcaatctctttaaatctctcgagaagcgg
ggattgttggctcgatttgtgatcgacgaggcgcactgcattagccagtggggtcacgat
tttcggaaagactatttgaacctgggaacgcttcgaacaaaatttccttctgtcccgatt
atggctttgactgccacagcaaactcgcaaacagaagctgatatcgtcaagaatctgaag
ctgagaaacccattcatcactcgctcaagctttaatcggccaaacctgacgtacgatgtg
cgtaagaaaacatccaagttcatgtctgagatcgcagacttcgttcgaaaacacatcgac
gattctgggattatctactgtttgtcaaaaaaagattgcgagcaaacagcagaaaagctg
atcaaggccttggggtttgagcacactcgaaaagcaagtcaaatttcgttttaccacgct
gggttggaagcgggagaccgcgcgtatcgtcaccacgagtggagcaaaggaaaaatcaag
ctgatttgtgctaccgttgcttttggaatgggaatcaacaagcccgatgtgcgctacgtg
atccaccacacaataccccaatcggtgacacattattaccaggaagctggtcgagcggga
cgagatggagaagtggctaactgcattctctactattccttcttggatctgactcgacgg
cgcaagctaatcacgaaggatcgcgacaatatgcagcatcgcaacgtgcatctgcagaac
ctgcgacgtatgaccgaattttgcgagaaccaagtggaatgccgccgaacatcccttctc
gagtactttggcgagcacttttcgagtgaacagtgccacggaacttgcgataactgcaaa
aacaaggtgctgggtatttcgtttgagaagtcagacgtgactgaggactgcgtggctctc
gctgagatgataaaaaccctccaagggagtggtgatccgacgacactggtgcaaattgct
caagtattccttggcatggtggtcaagggaagagagtggaagcaaaaccagtttgaacaa
ctcggaggatttggaaaaggcaaaggacggtactctcgcagtgaagtggagcgcattttg
tatcacatgattcttcgccagtatcttcgcgaagtggaccaaaccaacgcgaagggcttc
acgacgacgttcttatcgcttggaatcaatgccaatagactcatgcgtggcgagcgagtt
cgtatcgtttgcaaaacaaaataccagtctcgagcatctgccagtgatggcgcaccacaa
gagagtgctaagacctcgaaaaaaaaggctcctaagaaatctgcatcgacaaagacgaag
acagcagtaacaaggaagaatactaagaagaagaaggcgagtgtgaaggacgtggttgaa
gagctgagcgatgacgatgttgtggaggtggtcgctcgacccgcgactacagcggagtat
ccgctcatcccagagcgtatttcttctaggagaattcctgaggaccatgctgaaacactt
gctcagatcctcaaggactggcgtgctagtgtttgtgacagcgagaacctcatgccgtac
catatccttacgactggaggtattgcctcgattgccaatgcagttcccgtctcgaatgca
gagctactggagatcgacggtgtcggacgcattcgtgtcaagaaatatggagcagcgatt
attaacatcgtcaagacctacctcgaaaagaacaacctgactccatcacctgtgcaagca
gtgcgctctaccaacgtgctggacagcttagaagtgttggattctggtgtcgaggtcatc
gaagtccctgcagcgcccaagtcgtccccatttttccaggacaagaacaaacgcaaagct
tcgtcgacatcaacaaggcccactgcaactgccaatcgcatcgtgatcgatgatagtctg
gacgacattgattggggtgagctggatgcagacatgttgaatcagacaagctcaagtgct
gcaaccaacagtcgcaaacgatcgctggactcgaactcgacgtggactgccaagaagcga
agcaactga
DBGET
integrated database retrieval system
