Phytophthora infestans: PITG_10864
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Entry
PITG_10864 CDS
T01333
Name
(RefSeq) hypothetical protein
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
pif
Phytophthora infestans
Pathway
pif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PITG_10864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pif03019
]
PITG_10864
Enzymes [BR:
pif01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
PITG_10864
Messenger RNA biogenesis [BR:
pif03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PITG_10864
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
PITG_10864
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
9476066
NCBI-ProteinID:
XP_002901679
UniProt:
D0NH96
LinkDB
All DBs
AA seq
312 aa
AA seq
DB search
MTPGMRMLPRDGALTETSQKLLVMTYNVLAQCYVRSTFFPYCESSELRWKNRSKKLEAVF
ASSLPVSPDVICLQEVDNYKEFWAGMMKKLGYEGIFIKKTSTKPDGVAVFWNEKMLKMKE
SVQVSLDLPNGDESGEASTRGSVGAIVHFKHLATQLEFVVATTHLFWDPMQEDVKLLQSR
RMLRAIDEFASALEASTPVVFSGDFNSLPDSKVYSFITSRNHFKSAYAQYDADGEPKFTN
VNGESITDDGTMVPRFVGTLDYIFYRSPRMRPAALMELMSLEDASKEVALPSTISPSDHL
PLLCEFHIQPAF
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgactccaggaatgcgcatgttgccgcgcgatggcgccttgactgaaacctcacagaag
ttgctggtcatgacgtacaatgtgcttgcgcagtgctacgtgcgctctactttcttcccg
tactgcgagtccagtgagctccgctggaagaacagatccaaaaagttggaagctgtattc
gcctcgagtctgcccgtctcgcctgatgtcatctgtctgcaggaagtggacaactacaag
gagttttgggctggcatgatgaaaaagctcggatatgaaggtatcttcattaagaagacg
agcaccaaaccggacggtgtggctgtgttttggaatgagaagatgctgaagatgaaagag
tccgtgcaggttagtctggacctgcccaacggtgacgagtcgggtgaagcttcaaccaga
ggaagcgtcggtgcaattgtccactttaaacacctcgcgacgcaattagagtttgttgtc
gcgactacgcacttgttctgggacccaatgcaggaagacgtgaagctgctgcaatcacgc
cgaatgctgcgtgcaatcgacgagtttgcgagcgcgctggaagcatcaacgccagtcgtc
ttctccggtgacttcaactccttaccagacagcaaagtgtacagcttcatcacgagcaga
aaccactttaaaagcgcctacgcacagtatgatgcggatggtgaacccaagtttaccaac
gtcaacggcgagtctataacggatgatggcacgatggtgccgcgcttcgtcggtacactg
gactacattttctaccgctctcctaggatgcggccggctgcactcatggagctcatgtcg
ctcgaggacgcgagcaaggaggtcgcactgcccagtaccatctctccgtcggaccaccta
cctctcctatgcgaattccacatccagcctgctttctag
DBGET
integrated database retrieval system
